Pairwise Alignments

Query, 295 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

Subject, 275 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  119 bits (299), Expect = 6e-32
 Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 4/273 (1%)

Query: 24  RQSRRATLSLLMICAALLWISPFIWMLSSAFSATTFGVGMASLLPRWPLTLSNFRDAWQS 83
           R+     L++L   AAL+WI P  W   ++  +     G  SL+P     LS +  A  +
Sbjct: 5   RRLENIILTVLTFSAALVWIFPLYWTFVTSIRSDENVAGNTSLIPD-EFRLSAYVSAIFN 63

Query: 84  ADWISLYANTIFFTFGTFFVQLLTITTAGYVFACHEFRGKQTLFLLFLVQLMIMPVVMMV 143
              ++ Y N++          LL      Y  +   F G++ L+ + L   M+    ++V
Sbjct: 64  TKLMNWYINSVGTAAIVTVSVLLISMLCAYALSQIRFPGRRLLYGIVLASFMVPAQTLVV 123

Query: 144 PNMMTLKAFGLLNTLTGVMMPYFTSAFGVFLMRQAFLAIPKEIEEAALMEGCRWWQVLFR 203
              + +K   L+NT  G+++P   +   + + +Q F ++PKE+ EA +++G   + +LF+
Sbjct: 124 TQFILMKNLNLINTWAGIILPQLITPIVIIVYKQFFDSVPKEMREAVVLDGGGEYTILFK 183

Query: 204 VLLPMSWPSILAFATVSITYHWNEYLWPLMMLNDPDKQVLTVGLVSFAMGAESGGQWGMI 263
           V LP++W    A A V+    WN + WP +++   D   + VG+    +    G  +  +
Sbjct: 184 VYLPLNWGITTAMAIVTFITVWNAFFWPFLVVTSEDMMTIPVGITQ--VNDTFGVAYARL 241

Query: 264 SAGTLMVCLPLMLAFIVFQKQFLRSFGF-SGIK 295
            A  ++  LP+++A++VFQ++   +    SG+K
Sbjct: 242 MAIAMLAALPVIIAYVVFQRRVTEAIMISSGVK 274