Pairwise Alignments

Query, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dianthicola ME23

Subject, 569 a.a., ssDNA-specific exonuclease RecJ from Pseudomonas putida KT2440

 Score =  631 bits (1627), Expect = 0.0
 Identities = 326/556 (58%), Positives = 410/556 (73%), Gaps = 4/556 (0%)

Query: 20  SLPALLRRLYAQRGVRQMQELERSLRGLLDYRLLGGITQAVEVLRQALADNRRIMVVGDF 79
           +LP LL RLYA RGV+   EL++SL  LL Y+ L GI   V++L +A+   +RI++VGDF
Sbjct: 17  NLPPLLTRLYAARGVQSEAELDKSLARLLPYQQLKGIEAGVDLLVEAIDQRQRILIVGDF 76

Query: 80  DADGATSTALTVLALRSMGGREIQYLVPNRFEDGYGLSPEVVAQAAAKGAELIVTVDNGI 139
           DADGAT++ + VL LR +G   + YLVPNRFE GYGL+PE+V  A  +  +L++TVDNGI
Sbjct: 77  DADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEVALQRQPQLLITVDNGI 136

Query: 140 SSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFPSKALAGVGVAFYLMM 199
           SS  GV  A   G+ V+VTDHHLPGE LP A+A+INPN   C+FPSK+LAGVGV FY++M
Sbjct: 137 SSVDGVAAAKAAGLKVLVTDHHLPGEQLPDADAIINPNQPGCSFPSKSLAGVGVIFYVLM 196

Query: 200 ALRANLRESGWFAERGLAEPNLAELLDLVALGTVADVVPLDANNRILISQGLSRIRAGKC 259
           ALRA LR  G +  +   +PN+ ELLDLVALG+VADVVPLDANNRIL+ QGL RIRAG+ 
Sbjct: 197 ALRARLRSLGRYEAQ--PQPNIGELLDLVALGSVADVVPLDANNRILVHQGLERIRAGRA 254

Query: 260 RPGIRALLEVSNRDAVQLVASDLGFALGPRLNAAGRLDDMSVGVELLLCDDIVQARMLAS 319
           RPG++A+LEV+ RD  ++ ++DLGF LGPRLNAAGRLDDMS+G+E LLC+D   A+ +A 
Sbjct: 255 RPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIECLLCEDAALAQDMAQ 314

Query: 320 DLDALNQSRREIEAGMQVEALHLCEQLERSRDTLPLGLAMYHPEWHQGVVGILASRIKER 379
            LD LNQ R+ IE GMQ EAL   + L    +++P GL ++  +WHQGV+GILASR+KER
Sbjct: 315 QLDDLNQDRKSIEQGMQREALAQLKDLPV--ESMPYGLCLFDADWHQGVIGILASRLKER 372

Query: 380 FHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLMLKFGGHAMAAGLSLVED 439
           +HRP IAFA AGDG+LKGS RS+ G H+RDAL+ +   HP L+ KFGGHAMAAGLSL E 
Sbjct: 373 YHRPTIAFADAGDGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGGHAMAAGLSLPEA 432

Query: 440 RFDEFRQRFAELVGEWLDASQLEGVVWSDGELAIPELTLGTAEMLREAGPWGQAFPEPTF 499
            F  F + F E V   L    L G + SDG LA+ E  L  A+ LR AGPWGQ FPEP F
Sbjct: 433 NFSAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLAKALRHAGPWGQHFPEPLF 492

Query: 500 DGRFRLLQQRLVGERHLKVMVEPLGGGPLLDGIAFNIDTLLWPDSSVREVELAYKLDVNE 559
            G F+L++QR+VGERHLKV+++   G   LDGIAF ID  +WP+ +VR VELAYKLDVNE
Sbjct: 493 HGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDREVWPNPTVRWVELAYKLDVNE 552

Query: 560 FRGKRSVQLLIEHLWP 575
           FRG  SVQL+I H+ P
Sbjct: 553 FRGNESVQLMIAHMEP 568