Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 333 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

 Score =  141 bits (356), Expect = 2e-38
 Identities = 112/311 (36%), Positives = 152/311 (48%), Gaps = 29/311 (9%)

Query: 7   ALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECS------LLQAQPSDLQDFL 60
           A++E +L  L  ER L+  TL +Y  DL  +   L  H         L    P+D++  L
Sbjct: 26  AVVEGWLARLAHERRLSAKTLEAYARDLSVVLVRLTDHLGKRPTLPDLAALTPADVRAVL 85

Query: 61  AERLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVD 120
           A R   G    +  RLL+A R   ++L RE Q        + +PK+P+ LPK ++ A   
Sbjct: 86  ASRRAEGVAPRTLVRLLAAARSFGRHLEREGQGKVGALTAVRAPKVPKGLPKPVSVAAAR 145

Query: 121 ALL-----AAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGN 175
           AL      A    +  +  RD A++ LLY  GLR+SE +GLT   +S     + V GKGN
Sbjct: 146 ALADPDTRAGEAREAWVLARDAAVIGLLYGAGLRISEALGLTAGMLSSGTTQITVTGKGN 205

Query: 176 KERLVPLGEEAVYWLEQY-------LEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRI 228
           K R+VPL    +  +E Y       L   +P L  G     L P  R  Q+  +      
Sbjct: 206 KTRMVPLIAPVLAAVEAYRGLCPYPLAPDKP-LFRGAKGGPLSP--RIVQLAVE------ 256

Query: 229 KHYATLASIDSNKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERL 288
           +    L   DS   +PH LRH+FATHLL+ G DLR +Q LLGH+ LSTTQIYT V    L
Sbjct: 257 RMRGALGLPDS--ATPHALRHSFATHLLSRGGDLRAIQELLGHASLSTTQIYTQVDAAAL 314

Query: 289 RLLHQQHHPRA 299
               +  HPRA
Sbjct: 315 MNAWRAAHPRA 325