Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score =  359 bits (921), Expect = e-104
 Identities = 188/298 (63%), Positives = 220/298 (73%), Gaps = 1/298 (0%)

Query: 1   MQKQDQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFL 60
           M   D  LI+QFLDALWLE+ L++NT  SYR+DL     WL  H  SL  A    + D L
Sbjct: 1   MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHL 60

Query: 61  AERLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVD 120
           A RL+ GYK  S+AR LS +R  F+YL REK    DP+  +  P+L + LPK L+EA V+
Sbjct: 61  AWRLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVE 120

Query: 121 ALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLV 180
           ALL AP   + I  RD+AMLE+LYA GLRV+ELV LT+  V+LRQGV+RV+GKG+KERLV
Sbjct: 121 ALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLV 180

Query: 181 PLGEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSN 240
           P+GEEAV WLE+Y    R  LLNG+  DVLFPS R +QMTRQTFWHRIKH+A +A ID  
Sbjct: 181 PMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGID-K 239

Query: 241 KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPR 298
            LSPH LRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA  RL+ LH QHHPR
Sbjct: 240 PLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPR 297