Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

Subject, 298 a.a., Tyrosine recombinase XerD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  495 bits (1275), Expect = e-145
 Identities = 248/297 (83%), Positives = 265/297 (89%)

Query: 3   KQDQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAE 62
           +QD A IEQFLDALWLERNLAENTLS+YR DL  +  WL H   +L  AQ  DLQ  LAE
Sbjct: 2   EQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAE 61

Query: 63  RLEGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDAL 122
           R+EGGYKATSSARLLSAMRR FQ+LYREK R DDPSA L+SPKLPQRLPKDL+EAQV+ L
Sbjct: 62  RVEGGYKATSSARLLSAMRRFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERL 121

Query: 123 LAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPL 182
           L AP+ DQP+ELRDKAMLE+LYATGLRVSELVGLT+SD+SLRQGVVRVIGKGNKERLVPL
Sbjct: 122 LQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPL 181

Query: 183 GEEAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKL 242
           GEEAVYWLE YLE+ RPWLLNG ++DVLFPS RAQQMTRQTFWHRIKHYA LA IDS KL
Sbjct: 182 GEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKL 241

Query: 243 SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA 299
           SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLR LHQQHHPRA
Sbjct: 242 SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298