Pairwise Alignments

Query, 342 a.a., 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC from Dickeya dianthicola ME23

Subject, 332 a.a., Ribosomal RNA small subunit methyltransferase C from Pseudomonas putida KT2440

 Score =  185 bits (469), Expect = 2e-51
 Identities = 120/336 (35%), Positives = 178/336 (52%), Gaps = 12/336 (3%)

Query: 4   LTPASEVILRHSDEFVSRRVLFAGDLQDSLPTHFDAAAVTVHTTQYHHWQQLQPVLGDNV 63
           + P SEV+LR ++ F    ++      D L     A A T H         L+       
Sbjct: 1   MDPRSEVLLRQAELFQGPLLIAGAPADDLLGQLPQAQAWTWHAGDQ---AMLESRFAGRS 57

Query: 64  HFSLLAQAETVAGCDTLIYYWPKSKQEAQFQLFNLLSLLPVGCDIFVVGENRSGVRSAEG 123
           H+ + A     A  D+ + + PKS++ A + L N L+    G ++++VGE R G+  A  
Sbjct: 58  HYGVEAPE---AAFDSAVLFLPKSRELAAY-LLNALASRLAGRELYLVGEKRGGIEGAAK 113

Query: 124 ILEPIAAINKIDSARRCGLYHGRLETLPTFA-----LEDWWLEYDVDGVPVHTLPGVFSR 178
            L+      K+DSAR C L+   ++  P         E + L  +   + V +LPGVFS 
Sbjct: 114 QLQAFGKPRKLDSARHCQLWQVTIDQAPQAKPLESLAERFELALEDGPLQVVSLPGVFSH 173

Query: 179 EGLDTGSQLLLSTLEPHRKGKVLDLASGAGVLAAAFARLSPKIRLTLSDVGAAALEASRA 238
             LD G+ LLL  L+    G +LD   GAGVL A   R  P+ R+TL DV A A+ ASR 
Sbjct: 174 GRLDRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRL 233

Query: 239 TLAANGLEGQVIASNAYSDIQGRFDLIISNPPFHDGMQTSLHAAEVMIRGAASHLNQDGE 298
           TLAANGLEG+VI+ +          LI+SNPPFH G+ T+  A+E +++ +A HL + GE
Sbjct: 234 TLAANGLEGEVISGDGIDAAPTELSLILSNPPFHTGVHTNYQASENLLKKSAVHLRKGGE 293

Query: 299 LRIVANAFLPYPALLDDTFGSHEVIAQTGRFRVYRA 334
           +R+VAN+FL Y  L++   G+ +V  +   FR+Y+A
Sbjct: 294 MRLVANSFLRYQPLIEGALGNCQVRDEADGFRIYQA 329