Pairwise Alignments

Query, 544 a.a., SAM-dependent DNA methyltransferase from Dickeya dianthicola ME23

Subject, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 103/402 (25%), Positives = 159/402 (39%), Gaps = 57/402 (14%)

Query: 154 KRNDFCRAIINKLME-FSFERIFTQKFDFYATIFEYLIKDYNSNAGGKYAEYYTPHAVAR 212
           K     R +INK+ E   F R   Q+   +  ++E L++D  +   G   E+YTP  V  
Sbjct: 117 KSGQLLRQVINKIQEGVDFNR--AQERHEFGNLYEQLLRDLQN--AGNAGEFYTPRPVTE 172

Query: 213 IMAAILVPEAQRGTVRNVTCYDPSAGSGTLLM-NVAHA------IGEDRCSIFTQDISQK 265
            M  ++ P+     +      DP+ G+G  L   + H         ED  ++       +
Sbjct: 173 FMVRMVDPKLAEKVM------DPACGTGGFLTCAIEHKRRRYVKTAEDERTLQASIFGVE 226

Query: 266 SSSLLRLNLILNNLVHSIPYVIQ---GNTILHPYHKDGQDLKRFDYIVSNPPFKMDFSDF 322
              L  L    N ++H I    Q    NT+  P    G   +R   IV+NPPF     D 
Sbjct: 227 KKPLPHLLATTNMILHGIEVPSQIRHDNTLSKPLISWGPS-ERVHCIVANPPFGGMEED- 284

Query: 323 RNALDTKENQPRFFAGIPNIPKSAKDKMAIYQLFLQHIIYSLKPGGKAAVVVPTGFITAQ 382
              ++T            N P + + +     LFL  I+  LK GG+AAVV+P GF+  +
Sbjct: 285 --GIET------------NFPAAFRTRETA-DLFLVLIMQLLKDGGRAAVVLPDGFLFGE 329

Query: 383 SGIDKAIREHLVKNRMLAGVVSMPSNIF-ATTGTNVSILFIDAGNKEKVVLIDASGLGEK 441
            GI   I+E L+    L  +V +P+ +F   TG   ++LF   G   K V          
Sbjct: 330 -GIKSRIKEKLLTECNLHTIVRLPNGVFNPYTGIKTNLLFFTKGTPTKQVWFYEHQYPAG 388

Query: 442 VKDGKNQKTVLTPEEEQRICEVFTNQWN----------EEDFSVVVSYDEIAAKNYSFSA 491
           VK+    KT     EE  + E +   W           E  F+  VS +E+ A+N++   
Sbjct: 389 VKN--YSKTRPMRIEEFAVEEAW---WGSEADGFAARAENAFAWQVSVEELQARNWNLDC 443

Query: 492 GQYFEVRIEYSDITPAQFAAKMKGFSDNLDDLFNQSHKLEAE 533
                   E     P +         D + DL +Q   + AE
Sbjct: 444 KNPHTG--EQVSHDPDELLRNYASVQDEISDLRDQLKAVLAE 483