Pairwise Alignments

Query, 628 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dianthicola ME23

Subject, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

 Score =  458 bits (1178), Expect = e-133
 Identities = 269/569 (47%), Positives = 357/569 (62%), Gaps = 25/569 (4%)

Query: 1   MAEFETSFASLGLSAPILSALSELGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF 60
           M +    FA+L L+  I++A+   GYE+PS IQ + IP +L G D++G AQTG+GKTAAF
Sbjct: 1   MTQETGGFAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAF 60

Query: 61  SLPLLNNIKAELKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLR 120
           +LP+LN I    + PQ L+LAPTRELA+QVA A   ++K M GVNVVA+YGG     QLR
Sbjct: 61  ALPILNKIDVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLR 120

Query: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAE 180
           A+R G QIVV TPGRL DHL+R    LS +  LVLDEADEML++GF++D+E I   IPA 
Sbjct: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPAT 180

Query: 181 HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFL 240
            QT LFSAT+P +IR I  R +++P+ V+IQ+   T   I Q++  V+  +K  A++R L
Sbjct: 181 RQTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVLRLL 240

Query: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI 300
           E E+FDA I FVRTK ATL++A ALE  GY +AALNGD+ Q  RE+ ++ LKDGRLDI++
Sbjct: 241 EVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300

Query: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
           ATDVAARGLDV RI+ V N D+P D ESYVHRIGRTGRAGR GRALL V  RERR+L+ I
Sbjct: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI 360

Query: 361 ERTMKLTIPEVDLPNAELLGQRRLAQFAAKVQQQLESSDLDMYRALLGKLRPQEELDIET 420
           ER     + E  LPNA+ +   R+ +  + +   +  ++   +  L  +L          
Sbjct: 361 ERVTGQKVAEARLPNAQAVLDARIKKLTSSLAPLVAEAEA-THGELFDRLTTDLGCSARA 419

Query: 421 LAAALLKMAQGERPLVLPPESAAERR--------PRREFRERDERFER--RGDRNERAPR 470
           LA+ALL+ A   + L L   +A ER         PR E  ER ER ER  RGDR  RAP 
Sbjct: 420 LASALLRKATNGQALDL---AAVEREQPLVPSFAPRGERTERGERGERPDRGDRERRAPL 476

Query: 471 SSDERPARRERRDVGEMDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHS 530
              E   R            R  +G  DG+  ++++GAI NEG ++   IG I++  S S
Sbjct: 477 PLAEGRVR-----------CRTALGARDGIAAKNLLGAILNEGGLARDAIGRIQVRDSFS 525

Query: 531 TIELPKGMPGDLLSHFTRTRILNKPMNMQ 559
            +ELP+     LLS    TR+  K + ++
Sbjct: 526 LVELPEDGLEKLLSKLKDTRVAGKQLKLR 554