Pairwise Alignments

Query, 628 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dianthicola ME23

Subject, 629 a.a., ATP-dependent RNA helicase from Escherichia coli BL21

 Score = 1010 bits (2612), Expect = 0.0
 Identities = 536/636 (84%), Positives = 566/636 (88%), Gaps = 15/636 (2%)

Query: 1   MAEFETSFASLGLSAPILSALSELGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF 60
           MAEFET+FA LGL APIL AL++LGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
Sbjct: 1   MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF 60

Query: 61  SLPLLNNIKAELKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLR 120
           SLPLL N+  ELKAPQ+LVLAPTRELAVQVAEA  +FSKHM+GVNVVALYGGQRYDVQLR
Sbjct: 61  SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120

Query: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAE 180
           ALRQGPQIVVGTPGRLLDHLKRGTLDLS LSGLVLDEADEMLRMGFIEDVE IMAQIP  
Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180

Query: 181 HQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFL 240
           HQTALFSATMPEAIRRITRRFMK+PQEVRIQSSVTTRPDISQSYWTV+GMRKNEAL+RFL
Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240

Query: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI 300
           EAEDFDAAIIFVRTKNATLEVAEALER+GYNSAALNGDMNQALREQTLERLKDGRLDILI
Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI 300

Query: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
           ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360

Query: 361 ERTMKLTIPEVDLPNAELLGQRRLAQFAAKVQQQLESSDLDMYRALLGKLRPQ---EELD 417
           ERTMKLTIPEV+LPNAELLG+RRL +FAAKVQQQLESSDLD YRALL K++P    EELD
Sbjct: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD 420

Query: 418 IETLAAALLKMAQGERPLVLPPESAAERRPRREFRERDERFERRGDRNERAPRSSDERPA 477
           +ETLAAALLKMAQGER L++PP+  A  RP+REFR+RD+R  R  DRN+R PR   E   
Sbjct: 421 LETLAAALLKMAQGERTLIVPPD--APMRPKREFRDRDDRGPR--DRNDRGPRGDREDRP 476

Query: 478 RRERRDVGEMDLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKG 537
           RRERRDVG+M LYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKG
Sbjct: 477 RRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKG 536

Query: 538 MPGDLLSHFTRTRILNKPMNMQLMGDAQPHERRERREGGERG----ERSGARGF-GERAG 592
           MPG++L HFTRTRILNKPMNMQL+GDAQPH   ERR GG RG     R G R F GER  
Sbjct: 537 MPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERR-GGGRGFGGERREGGRNFSGERRE 595

Query: 593 TGSGRGRPFNGERREGGERRGSRDGQRAPRRVSNNA 628
            G G GR F+GERREG  R   RD     RR   +A
Sbjct: 596 GGRGDGRRFSGERREG--RAPRRDDSTGRRRFGGDA 629