Pairwise Alignments

Query, 496 a.a., transcription termination/antitermination protein NusA from Dickeya dianthicola ME23

Subject, 523 a.a., Transcription termination/antitermination protein NusA from Azospirillum sp. SherDot2

 Score =  424 bits (1091), Expect = e-123
 Identities = 233/502 (46%), Positives = 326/502 (64%), Gaps = 13/502 (2%)

Query: 4   EILAVVEAVSNEKAVPREKIFEALETALATATKKKYEQEIDVRVCIDRKTGDFDTFRRWL 63
           E+L V +AV+ EK + R+++ EA+E A+  A + KY  E D+R  IDRKTGD    R   
Sbjct: 2   ELLQVADAVAREKNIDRDEVLEAMEQAIQKAGRSKYGHEHDIRARIDRKTGDIHLTRHLE 61

Query: 64  VVNEVTQPTREITLEAAQFEEPSMDLGGYIEDQIESVTFDRITTQTAKQVIVQKVREAER 123
           VV  V     ++TL  AQ  +    LG ++ D +  + F RI  QTAKQVIVQKVR+AER
Sbjct: 62  VVETVENEATQVTLPYAQKRKAGAKLGDFLVDPLPPIDFGRIAAQTAKQVIVQKVRDAER 121

Query: 124 AMVVDQFREQEGEIVTGVVKKVNRDNISLDLGSNAEAVIGREDMLPRENFRPGDRIRGVL 183
               ++++++ GEIV G+VK+V   N+++DLG  AEA++ R+++LPRE+F+ GDR+R  +
Sbjct: 122 KRQFNEYKDRNGEIVNGLVKRVEYGNVTVDLG-RAEAILRRDELLPREHFKNGDRVRAYI 180

Query: 184 YAVRPEARGAQLFVSRSRPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDK 243
           + VR E RG Q+F+SR+ P  + +LF  EVPEI + +IEIKA ARDPGSRAKIAV ++D 
Sbjct: 181 FDVREEPRGPQIFLSRTHPMFMAKLFAQEVPEIYDGIIEIKAVARDPGSRAKIAVLSHDS 240

Query: 244 RIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKH 303
            IDPVGACVGMRG+RVQAV  EL GE+IDI+ W+     FV+NA+APA+VA +V+D+D H
Sbjct: 241 SIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWNGEAPTFVVNALAPAEVAKVVLDDDNH 300

Query: 304 TMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTIEDLQAKHQAEAHAAIDIFTKHL 363
            +++ V    L+ AIGR GQNVRLAS L+GW+++++T ++   +   E H    +F + L
Sbjct: 301 RIEVVVPDDQLSLAIGRRGQNVRLASMLTGWDIDILTEQEESERRSEEIHNRSALFMQAL 360

Query: 364 DIDEEFATALVEEGFSSLEELAYVPIHELQDIDGLDEETIEALRERAKAALTTL-ALANE 422
           D+D+  A  LV EGF+S+EE+AYV   EL +I+G DE   + L++RA A L      ANE
Sbjct: 361 DVDDVIAHLLVAEGFTSVEEIAYVETEELAEIEGFDESVADELKQRALAFLEVRDEQANE 420

Query: 423 ENRGSGQPAEDLL-NLSGLSRELAFKLAACGVCTLEDLAEQGVDDLADIEGL-------G 474
                G   ED++  L+G S     KL   GV TL+DLA+   D+L +I G         
Sbjct: 421 RRLELG--VEDIIAELTGFSATQLVKLGENGVKTLDDLADLAGDELVEILGKDGAKDAPS 478

Query: 475 EEQAGELIMAARNICWFGGSNE 496
           EE+A  +IMAAR   WF G  E
Sbjct: 479 EEEANAIIMAAR-AHWFEGEGE 499