Pairwise Alignments

Query, 271 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

Subject, 281 a.a., glucose/xylose ABC transporter, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 1e-32
 Identities = 78/268 (29%), Positives = 136/268 (50%), Gaps = 5/268 (1%)

Query: 6   AFWRVLIWIVALMTVLPFGLALMTSFKTQTELFQG-IFTLPSRFNLDNYLTAWQQGHFNL 64
           A + VLI +  L+ ++P  + L+TSFKT  ++  G + + P+      ++ AW     + 
Sbjct: 16  AIYAVLI-LAVLLYLVPLVVMLLTSFKTPEDISSGNLLSWPTVVTGIGWVKAWAT--VDG 72

Query: 65  YFMNSILVVVPVVISSLLLGILSGFGFAFLRIPGKRLFAAALALGMVLPSEAFIIPLYHE 124
           YF NSI + VP V+ S  +G L+G+  +F R  G +LF   L  G  LP +  ++P    
Sbjct: 73  YFWNSIKITVPAVLISTAIGALNGYVLSFWRFKGSQLFFGLLLFGCFLPFQTVLLPASFT 132

Query: 125 LHWLGLTNSYLALILPQVALSMPFATLMIASAFQQVPRELLEASVMDGAPRLKILWGILV 184
           L  +GL ++   L+   V   + F TL   + +  +P  L++A+ +DGA    I   I++
Sbjct: 133 LGKMGLASTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALIKAARLDGAGFFTIFRQIIL 192

Query: 185 PAIWPMLSTLALLLFIWTWNEFLIPLILVNRD-ELRTLPIGMMFFQNKNTINIPVLMAGA 243
           P   P++    +  F   WN+FL  ++  + D +  T+ +  +   +       V MA A
Sbjct: 193 PMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTSTGAKEYNVDMAAA 252

Query: 244 MIVILPLIAIFLCFQRKFISGVTEGAVK 271
           MI  LP + +++   + F+ G+T GAVK
Sbjct: 253 MIAGLPTLLVYVIAGKYFVRGLTAGAVK 280