Pairwise Alignments

Query, 542 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 539 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  227 bits (578), Expect = 1e-63
 Identities = 175/550 (31%), Positives = 258/550 (46%), Gaps = 40/550 (7%)

Query: 13  HALLTAGLLSLAVGA-SPFAYAADAAVTPVQGGTLNIGLGSDTPV---IDPSITAYSVAA 68
           H LL  G L+L + A SP    AD   T     TLNI    D      +DP    +    
Sbjct: 5   HQLLAIGTLALGLTACSP----ADNTST---SKTLNIAFWGDNTTLVSVDPFQVYWLEHR 57

Query: 69  LVARNVVDSLVGQ-AEDNRFTPWLAERWEISDNNTRYTFHLRKDVTFSDGTKLDAAAVK- 126
           ++ RNVV+SL  Q  +  R  PWLA+ WE+  +   YTFHLR+DVTFS+G + DA AVK 
Sbjct: 58  VLLRNVVESLTDQDPQTGRIIPWLAKTWEVGADALSYTFHLREDVTFSNGERFDAHAVKT 117

Query: 127 -YNLDRILDPKTTSSYAKSLLGPIDSISTPDDDTVVISYKSPFAALLQGLSLPYLGIQSP 185
            ++ ++    +  +++  + L   D     DD TV +    P A  LQ  S   L I +P
Sbjct: 118 AFDSNKAFASQLPATFGATYLAGYDHAEVIDDFTVRLVLAKPNAGFLQATSTTNLAILAP 177

Query: 186 TY--LKNTPNTSNTIVGSGPFILESFVKGSGSRLKKRPDYHWGPGYAAHTGPAYLDKIEF 243
               L     +   I+G+GPF L+ +    G+RL KR DY W      + G AYLD ++ 
Sbjct: 178 ASYRLSAQQRSLGKIIGTGPFTLDHYTPEVGARLLKRADYAWPSANVRNQGAAYLDAVDI 237

Query: 244 KYLPESSVRLGALSSGQVQAIDAVPPANAAALK----KDARLELITRENPGVNRVLYLNT 299
            Y+PE SVR G    G+V  +    P +   L+    K A ++  +R  PG    LY NT
Sbjct: 238 SYIPEESVRNGLFLQGKVDILWPRNPFSEVDLQLFQSKGATIQ--SRSLPGPAMNLYPNT 295

Query: 300 SKGP-FQDVNVRRAFLHAVDAASATKVAFFGTLKAADNILGPSTLYYDKPAASLGGFDLK 358
                  D  VR A   A+D  S     +         +   +T ++      L  +D K
Sbjct: 296 RNDRLLGDRQVRLALQKAIDRTSYAHTVYNTAFPVVSGVYDVTTPFFKAQTDKL-AYDPK 354

Query: 359 KAIQLLDDAGWKTKDGEGYRTKDGKRLTVNFVYSTSSSEAAEITLFQAVQYQVKQAGIDV 418
            A QLLD AGW  K  +GYR K+G+RLT+   Y+ + +E+A   L   VQ Q+++ GID+
Sbjct: 355 GAEQLLDAAGWH-KGDDGYRHKNGQRLTLR--YNLTPAESAGDVL---VQDQLRKVGIDL 408

Query: 419 QLNPVDGGGFISRTNDNDYDIASNYFVRAEPDILRTVFDSNYIPPNGNNFSRTHSLDDKL 478
           +LN +    +++  +   YD+ S Y  RA+P IL+T+ D      N    +      D L
Sbjct: 409 KLNVLTRAEWVTGNSTGAYDLTSTYMTRADPIILQTILDPR--AANSATLATNTYEPDTL 466

Query: 479 RKA--------IGAGDGERQQLYSAIQHELLDQAYAVPLFVPAYQLGLSKKVQGISWATN 530
            KA            D +R Q Y  +Q  L+D+A A PL+   +Q   + +V+   W   
Sbjct: 467 AKAQALFDSGITATADTQRAQAYGQLQDLLVDEASAFPLYERVWQAATAPRVKHFHWTAE 526

Query: 531 AKPNFYDVWI 540
                 D+ +
Sbjct: 527 GFALLSDIQV 536