Pairwise Alignments

Query, 279 a.a., ABC transporter permease from Dickeya dianthicola ME23

Subject, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score =  188 bits (477), Expect = 1e-52
 Identities = 107/272 (39%), Positives = 158/272 (58%), Gaps = 2/272 (0%)

Query: 4   PYRTAYRSPWLAPATLLPATAVLLLLLAVFFPAL-FTHLLPDEMDMEAVLQPPGANHWFG 62
           P     R  W APA  L    +L++L+A+    L ++   P ++D+ +  Q P A HW G
Sbjct: 8   PVAAKRRRVW-APANALIGGGLLVVLIALALMGLVWSPFDPLKIDLMSRFQAPSAAHWLG 66

Query: 63  TDTLGRDVFTRVVYGTSLSLSIGVGAMLIACLGGVLLGTLSALAPLPVRRVLVRLLDIML 122
           TD  GRDVF+R++ G   SL + +  + +A L G L+G L+        RVL+   D +L
Sbjct: 67  TDEFGRDVFSRLLIGARTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALL 126

Query: 123 AFPEMLLALLVIAVLGRGPENTLLAVGLAGVAGYARLVRSQVLQVKLSGYVEHAVALGEH 182
           AFP +L+AL ++A++G      +LA+G+A      R+VR  VL ++   Y+E +  +G  
Sbjct: 127 AFPGILMALGIMAIIGASKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNS 186

Query: 183 PLYIVVRHIIPNTLRPLLILATIGVGNAVLSASALSFLGLGVVPPTAEWGALLADGRNFL 242
            LY ++RHI PN L PL +LAT   G A+LS SALSFLGLGV PP A WG +LA  R ++
Sbjct: 187 ELYTMLRHIAPNCLAPLCVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYI 246

Query: 243 DIAPWVSLFPASVVALSVIVITLLGRRLQAML 274
             APW+ +FP   + L+++ I L G  L+  L
Sbjct: 247 ASAPWLGVFPGLFICLTLLAINLFGDALRDRL 278