Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  389 bits (998), Expect = e-112
 Identities = 236/552 (42%), Positives = 332/552 (60%), Gaps = 35/552 (6%)

Query: 5   ASQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAG 64
           + Q L+ V  L V F +       V  +SF +  GE LALVGESGSGKSVTA +++ L  
Sbjct: 2   SEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLP 61

Query: 65  ERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVA 124
               +  +    +R++G   +L   S++  Q++RG  I  + Q+ + SL+PL  I +++ 
Sbjct: 62  Y--PLARHPSGSIRYEGK--DLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQIN 117

Query: 125 EPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPK 184
           E LL HK  +  +  AR  ELL  VGIP+P  R    PHELSGG RQR +IA ALA  P+
Sbjct: 118 EILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPE 177

Query: 185 LLIADEPTTALDATVQQQVLKLFTAL-AQAGHGVLLITHDLAVVSQVADQVMVMQNGALV 243
           LLIADEPTTALD TVQ ++L+L   L A+ G  +LLI+HDL +V ++A +V VMQ G +V
Sbjct: 178 LLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIV 237

Query: 244 ERGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGL 303
           E+     + S+PQH YT+ L+ A P+       L   NP+           G P      
Sbjct: 238 EQAECATLFSSPQHHYTQMLINAEPSG------LPAHNPV-----------GAP------ 274

Query: 304 ALQVDGVSVSFKRPDG------SRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILA 357
            L+VD + V F    G        + AV+ ++ ++ +G+TLGIVGESGSGK+TLG  IL 
Sbjct: 275 LLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILR 334

Query: 358 LQPPDSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRR 417
           L     G I   G+    L+++  RPLR  +Q + QDP  S  P+  +  ++ + LR+ R
Sbjct: 335 LISSQGG-IRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHR 393

Query: 418 DLSPQARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVS 477
             + Q ++  I+A LE VGL P    R P   SGGQRQRI+IA+AL  +P +++ DEP S
Sbjct: 394 IGTAQEQEAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTS 453

Query: 478 ALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIF 537
           ALD T Q QV++LL  LQQ+ +L+ +FISHDL VV+ +SH++ V+K G+VVE+G  + IF
Sbjct: 454 ALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIF 513

Query: 538 NQPQHPYTRQLL 549
           + PQHPYTRQLL
Sbjct: 514 HAPQHPYTRQLL 525



 Score =  174 bits (441), Expect = 8e-48
 Identities = 102/254 (40%), Positives = 153/254 (60%), Gaps = 9/254 (3%)

Query: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQP---- 360
           ++V  ++V F   D      V+ +S  + +GETL +VGESGSGK+     IL L P    
Sbjct: 7   IEVRDLAVEFVTGDQVNRV-VDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65

Query: 361 -PDSGDILLSGKPWSALSERERRPLRA-RIQTITQDPLSSFDPQFTIEQLLLQPLRLRRD 418
              SG I   GK     SE+  + +R  RI  I Q+P++S +P   IE+ + + L L + 
Sbjct: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125

Query: 419 LSPQARQQRILALLELVGLSPTL--LARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPV 476
           L+ +    R L LL++VG+      L   P  LSGGQRQR+ IA ALA EPE+L+ DEP 
Sbjct: 126 LTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185

Query: 477 SALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQI 536
           +ALDVT Q ++L+LL  LQ R+ ++++ ISHDL +V+ ++HR+ VM+ G +VE+     +
Sbjct: 186 TALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATL 245

Query: 537 FNQPQHPYTRQLLS 550
           F+ PQH YT+ L++
Sbjct: 246 FSSPQHHYTQMLIN 259



 Score =  163 bits (413), Expect = 1e-44
 Identities = 108/267 (40%), Positives = 153/267 (57%), Gaps = 21/267 (7%)

Query: 8   PLLRVEGLNVTFPSPHG-------PVESVRNLSFQVNPGEILALVGESGSGKSVTARTLV 60
           PLL V+ L V FP   G        V++V  ++F +  G+ L +VGESGSGKS     ++
Sbjct: 274 PLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAIL 333

Query: 61  GLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIG 120
            L   +  I        R  G   NL+ L+ +  + +R RE+  V QD   SL P   + 
Sbjct: 334 RLISSQGGI--------RFHGQ--NLEGLNQKAVRPLR-REMQVVFQDPFGSLSPRMCVA 382

Query: 121 QEVAEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALA 180
             V E L  H++ +  +  A +   L +VG+ DP  R  +YPHE SGG RQR  IA AL 
Sbjct: 383 DIVGEGLRIHRIGTAQEQEAAIIAALEEVGL-DPRTRH-RYPHEFSGGQRQRIAIARALV 440

Query: 181 AGPKLLIADEPTTALDATVQQQVLKLFTALAQAGH-GVLLITHDLAVVSQVADQVMVMQN 239
             P L++ DEPT+ALD TVQ+QV++L   L Q  +   L I+HDLAVV  ++ Q+MV+++
Sbjct: 441 LKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLFISHDLAVVKALSHQLMVIKH 500

Query: 240 GALVERGAARQVLSAPQHPYTRRLLAA 266
           G +VE+G A+ +  APQHPYTR+LL A
Sbjct: 501 GHVVEQGDAQAIFHAPQHPYTRQLLEA 527