Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  390 bits (1003), Expect = e-113
 Identities = 237/553 (42%), Positives = 337/553 (60%), Gaps = 27/553 (4%)

Query: 1   MSQSASQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLV 60
           MSQS   PL+ V  L+V++       +++R LSF +  GE LA+VGESGSGKS  A  L+
Sbjct: 1   MSQS---PLIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALL 57

Query: 61  GLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIG 120
           GL    A+I    + +   DG   ++   S+R  +Q+RGR IG V QD +VSL+P +RIG
Sbjct: 58  GLLPGNARIDQGQLWV---DG--VDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIG 112

Query: 121 QEVAEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALA 180
           Q++AE L   +        A+V  LL QVG+ +PA RA QYPHELSGG+RQR LIA ALA
Sbjct: 113 QQIAEALQLARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALA 172

Query: 181 AGPKLLIADEPTTALDATVQQQVLK-LFTALAQAGHGVLLITHDLAVVSQVADQVMVMQN 239
             P+L+IADEPT+ALD TVQ+++L  L   +A+ G  +L+ITHDL +    AD+++VM+ 
Sbjct: 173 GEPRLIIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQ 232

Query: 240 GALVERGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGE 299
           G  VE G+ RQ+L   + PYTR LL A P    R    A   P  Q     LS  G+  E
Sbjct: 233 GEQVEHGSPRQILWGARQPYTRALLDAAPAFVPRRRPAA---PRGQTPLLRLSHVGKRFE 289

Query: 300 KSGLALQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQ 359
             G                    TA++++SL +  G+TL IVGESGSGK+T  ++ L L+
Sbjct: 290 LPG---------------KNEHYTALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLE 334

Query: 360 PPDSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLRLRRDL 419
            P  G ++ +G+  +  +  + RPLR RIQ + Q+P ++ DP+FT+   +++PL     L
Sbjct: 335 KPSQGQVVFAGEDVTGYTWSQFRPLRRRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLL 394

Query: 420 SPQARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPVSAL 479
             +A +++   L+  V L    L R P+ LSGGQRQR++IA+ALA EPEVL+ DEPVSAL
Sbjct: 395 RGEALERKARELITRVQLPVQFLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSAL 454

Query: 480 DVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQ 539
           DV+ QAQ+L LL  LQ+ L ++ V +SHDL VV  M+ ++ V++ G VVE+G   Q+ ++
Sbjct: 455 DVSVQAQILALLDELQRELGMAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSK 514

Query: 540 PQHPYTRQLLSTV 552
               YTR L+  +
Sbjct: 515 SASAYTRALIDAI 527



 Score =  179 bits (454), Expect = 2e-49
 Identities = 112/263 (42%), Positives = 156/263 (59%), Gaps = 9/263 (3%)

Query: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQPP--- 361
           ++V  +SVS+    G R  A+  +S ++ +GETL +VGESGSGK+TL   +L L P    
Sbjct: 7   IEVRDLSVSYSFA-GQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGNAR 65

Query: 362 -DSGDILLSGKPWSALSERERRPLRAR-IQTITQDPLSSFDPQFTIEQLLLQPLRLRRDL 419
            D G + + G   +  SER RR LR R I  + QDP+ S +P   I Q + + L+L R  
Sbjct: 66  IDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARGR 125

Query: 420 SPQARQQRILALLELVGLS-PTLLARR-PQSLSGGQRQRISIAQALAAEPEVLVCDEPVS 477
               ++ ++LALL+ VGL  P L AR+ P  LSGG RQR+ IA ALA EP +++ DEP S
Sbjct: 126 RYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLIIADEPTS 185

Query: 478 ALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIF 537
           ALDVT Q ++LD L  L     +S++ I+HDLG+    + R+ VMK G  VE G+  QI 
Sbjct: 186 ALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGSPRQIL 245

Query: 538 NQPQHPYTRQLLSTVAPVVINRQ 560
              + PYTR LL   AP  + R+
Sbjct: 246 WGARQPYTRALLD-AAPAFVPRR 267



 Score =  150 bits (378), Expect = 2e-40
 Identities = 100/266 (37%), Positives = 145/266 (54%), Gaps = 19/266 (7%)

Query: 8   PLLRVEGLNVTF--PSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE 65
           PLLR+  +   F  P  +    ++ +LS +++ G+ LA+VGESGSGKS   R  +GL   
Sbjct: 277 PLLRLSHVGKRFELPGKNEHYTALHDLSLELHAGQTLAIVGESGSGKSTALRIALGLE-- 334

Query: 66  RAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRG--REIGFVLQDALVSLDPLRRIGQEV 123
             +     +     D        ++   W Q R   R I  V Q+   +LDP   +   V
Sbjct: 335 --KPSQGQVVFAGED--------VTGYTWSQFRPLRRRIQLVQQNPFAALDPRFTVFDSV 384

Query: 124 AEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGP 183
            EPL++  L     +  +  EL+ +V +P       + P ELSGG RQR  IA ALA  P
Sbjct: 385 VEPLVSFGLLRGEALERKARELITRVQLP--VQFLDRLPRELSGGQRQRVAIARALALEP 442

Query: 184 KLLIADEPTTALDATVQQQVLKLFTALA-QAGHGVLLITHDLAVVSQVADQVMVMQNGAL 242
           ++L+ DEP +ALD +VQ Q+L L   L  + G   +L++HDLAVV+ +ADQV+V++ G +
Sbjct: 443 EVLLLDEPVSALDVSVQAQILALLDELQRELGMAYVLVSHDLAVVASMADQVLVLRRGQV 502

Query: 243 VERGAARQVLSAPQHPYTRRLLAAIP 268
           VE+G A QVLS     YTR L+ AIP
Sbjct: 503 VEQGPALQVLSKSASAYTRALIDAIP 528