Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 529 a.a., fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  376 bits (965), Expect = e-108
 Identities = 229/557 (41%), Positives = 330/557 (59%), Gaps = 43/557 (7%)

Query: 6   SQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE 65
           +Q LL +E L+V F         V ++S Q+  GE LALVGESGSGKSVTA +++ L   
Sbjct: 2   TQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRL--- 58

Query: 66  RAQIQANAIEL----VRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQ 121
              + +  +E     +R  G   +L   SD+  + VRG +I  + Q+ +VSL+PL  + +
Sbjct: 59  ---LPSPPVEYLSGDIRFHGE--SLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEK 113

Query: 122 EVAEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAA 181
           ++ E L  H+   R      +   L +VGI   A R   YPH+LSGG RQR +IA AL  
Sbjct: 114 QLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLT 173

Query: 182 GPKLLIADEPTTALDATVQQQVLKLFTAL-AQAGHGVLLITHDLAVVSQVADQVMVMQNG 240
            P+LLIADEPTTALD +VQ Q+L+L   L  +   G+L ITH+L++V ++A +V VMQNG
Sbjct: 174 RPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNG 233

Query: 241 ALVERGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEPGEK 300
             VE+  A  + ++P HPYT++LL + P+            PL + ASTLL         
Sbjct: 234 RCVEQNYAATLFASPTHPYTQKLLNSEPSG--------DPVPLPEPASTLLD-------- 277

Query: 301 SGLALQVDGVSVSFKRPDG------SRMTAVNNISLTVERGETLGIVGESGSGKTTLGKV 354
                 V+ + V+F    G           V NIS T+  GETLG+VGESGSGK+T G  
Sbjct: 278 ------VEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLA 331

Query: 355 ILALQPPDSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDPQFTIEQLLLQPLR 414
           +L L     G I+  G+P   L+ R+  P+R RIQ + QDP SS +P+  + Q++ + LR
Sbjct: 332 LLRLIN-SQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLR 390

Query: 415 LRRD-LSPQARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIAQALAAEPEVLVCD 473
           + +  LS   R+Q+++A++  VGL P    R P   SGGQRQRI+IA+AL  +P +++ D
Sbjct: 391 VHQPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD 450

Query: 474 EPVSALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTV 533
           EP S+LD T QAQ+L LL +LQQ+  L+ +FISHDL VV+ + H++ +++ G VVE+G  
Sbjct: 451 EPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIILRQGEVVEQGPC 510

Query: 534 EQIFNQPQHPYTRQLLS 550
            ++F  PQ  YTRQLL+
Sbjct: 511 ARVFATPQQEYTRQLLA 527



 Score =  186 bits (472), Expect = 2e-51
 Identities = 107/255 (41%), Positives = 157/255 (61%), Gaps = 9/255 (3%)

Query: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVILALQPPD-- 362
           L ++ +SV F+     R T VN++SL +E GETL +VGESGSGK+     IL L P    
Sbjct: 6   LAIENLSVGFRHQQTVR-TVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPV 64

Query: 363 ---SGDILLSGKPWSALSERERRPLRA-RIQTITQDPLSSFDPQFTIEQLLLQPLRLRRD 418
              SGDI   G+     S++  R +R  +I  I Q+P+ S +P  T+E+ L + L L R 
Sbjct: 65  EYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRG 124

Query: 419 LSPQARQQRILALLELVGLSPTL--LARRPQSLSGGQRQRISIAQALAAEPEVLVCDEPV 476
           +  +A +  IL  L+ VG+      L   P  LSGG+RQR+ IA AL   PE+L+ DEP 
Sbjct: 125 MRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPT 184

Query: 477 SALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQI 536
           +ALDV+ QAQ+L LL  LQ  L++ M+FI+H+L +V+ ++HR+AVM++G  VE+     +
Sbjct: 185 TALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATL 244

Query: 537 FNQPQHPYTRQLLST 551
           F  P HPYT++LL++
Sbjct: 245 FASPTHPYTQKLLNS 259