Pairwise Alignments

Query, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  391 bits (1005), Expect = e-113
 Identities = 235/572 (41%), Positives = 347/572 (60%), Gaps = 33/572 (5%)

Query: 1   MSQSASQPLLRVEGLNVTFPSPHGPVESVRNLSFQVNPGEILALVGESGSGKSVTARTLV 60
           M  + +  LL VEGL+V F    G    V ++SF+V PG  +A+VGESGSGKSVT+ + +
Sbjct: 1   MIAANANALLSVEGLSVEF----GDSRVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTM 56

Query: 61  GLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIG 120
            LA             +  +G   +L   S ++ + +RG+EI  + Q+ + SL+P+  IG
Sbjct: 57  RLADMMGATYPTG--KILFEGK--DLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIG 112

Query: 121 QEVAEPLLTHKLASRSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALA 180
            ++ E L+ H+   ++    +  +LL  V +PD A    +YPH+LSGG+RQR +IA ALA
Sbjct: 113 DQICEVLVLHEKLGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALA 172

Query: 181 AGPKLLIADEPTTALDATVQQQVLKLFTALAQA-GHGVLLITHDLAVVSQVADQVMVMQN 239
             PKLLIADEPTTALD T+Q Q+L +   L +  G G++ ITHD+ VV+++AD V+VM  
Sbjct: 173 CRPKLLIADEPTTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWK 232

Query: 240 GALVERGAARQVLSAPQHPYTRRLLAAIPTAATRGNWLAGENPLSQQASTLLSSAGEP-- 297
           G  VE G  + + + PQHPYTR LL+A+P   +    + GE    +   T+L   G+P  
Sbjct: 233 GKKVEEGPVKDIFANPQHPYTRALLSAVPRLGS----MEGEAFPKRLPLTVLQD-GQPVV 287

Query: 298 -GEK---------SGLALQVDGVSVSF---KRPDGS---RMTAVNNISLTVERGETLGIV 341
            GE+             L V  + V F   K   G    R++AV  +S  +  GETL +V
Sbjct: 288 IGEERVQDTAKYDQKPLLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALV 347

Query: 342 GESGSGKTTLGKVILALQPPDSGDILLSGKPWSALSERERRPLRARIQTITQDPLSSFDP 401
           GESGSGK+T+G+ I  LQ   SG+I  +G+ +S +S  ER  +R  +Q I QDP +S DP
Sbjct: 348 GESGSGKSTIGRTIQQLQTAVSGEIAFNGRSYSQMSAAERFRMRQEVQYIFQDPFASLDP 407

Query: 402 QFTIEQLLLQPLRLRRDLSPQ-ARQQRILALLELVGLSPTLLARRPQSLSGGQRQRISIA 460
           + T+   + +P+     ++ Q A ++R+  LLE VGLS    AR P   SGGQRQR+ IA
Sbjct: 408 RKTVGFSIAEPINTHGLINDQKAVRRRVDELLERVGLSSEHAARYPHEFSGGQRQRVCIA 467

Query: 461 QALAAEPEVLVCDEPVSALDVTTQAQVLDLLVALQQRLHLSMVFISHDLGVVQHMSHRIA 520
           +ALA++P++++ DE +SALDV+ QAQ+++L + LQ    L+ +FISHD+ VV+ MSHR+A
Sbjct: 468 RALASDPKLIIADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVA 527

Query: 521 VMKDGNVVERGTVEQIFNQPQHPYTRQLLSTV 552
           V+  G ++E G+ +Q+F  P H YTR+LLS V
Sbjct: 528 VLYLGQIMELGSRQQVFETPTHDYTRRLLSAV 559



 Score =  180 bits (457), Expect = 1e-49
 Identities = 111/273 (40%), Positives = 163/273 (59%), Gaps = 21/273 (7%)

Query: 7   QPLLRVEGLNVTFPSPHG-------PVESVRNLSFQVNPGEILALVGESGSGKSVTARTL 59
           +PLL V+ L V F             + +V+ +SF ++ GE LALVGESGSGKS   RT+
Sbjct: 302 KPLLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIGRTI 361

Query: 60  VGLAGERAQIQANAIELVRHDGSRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRI 119
                   Q+Q      +  +G   +  + ++R   +   +E+ ++ QD   SLDP + +
Sbjct: 362 -------QQLQTAVSGEIAFNGRSYSQMSAAERFRMR---QEVQYIFQDPFASLDPRKTV 411

Query: 120 GQEVAEPLLTHKLAS-RSDVAARVAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASA 178
           G  +AEP+ TH L + +  V  RV ELL +VG+   +  AA+YPHE SGG RQR  IA A
Sbjct: 412 GFSIAEPINTHGLINDQKAVRRRVDELLERVGLS--SEHAARYPHEFSGGQRQRVCIARA 469

Query: 179 LAAGPKLLIADEPTTALDATVQQQVLKLFTAL-AQAGHGVLLITHDLAVVSQVADQVMVM 237
           LA+ PKL+IADE  +ALD ++Q Q++ LF  L A+ G   L I+HD+AVV +++ +V V+
Sbjct: 470 LASDPKLIIADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVL 529

Query: 238 QNGALVERGAARQVLSAPQHPYTRRLLAAIPTA 270
             G ++E G+ +QV   P H YTRRLL+A+P A
Sbjct: 530 YLGQIMELGSRQQVFETPTHDYTRRLLSAVPVA 562