Pairwise Alignments

Query, 372 a.a., LPS export ABC transporter permease LptF from Dickeya dianthicola ME23

Subject, 372 a.a., permease from Pseudomonas simiae WCS417

 Score =  201 bits (511), Expect = 3e-56
 Identities = 121/372 (32%), Positives = 200/372 (53%), Gaps = 10/372 (2%)

Query: 1   MIIIRYLVRETFKSQVAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGVPAMA 60
           MI+ RYL RE   +  A+  +LL+I    + V+ L  A  G +    +  ++G  +P   
Sbjct: 1   MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFL 60

Query: 61  QLILPLSLFLGLLMTFGRLYAESEITVMHACGLSKSVLLKAALLLSLLTASLAAANVLWL 120
           QLILPL LFLG+L+ +GRLY ESE+TV+ A G+S+  LL   ++ +   A + A   L L
Sbjct: 61  QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLGL 120

Query: 121 SPWSSRHQDEVLAEARANPGMASLAEGQFQQTQDGNSVLFVGKVNG--GDFERIFLAQLH 178
           +P  +     VL +  A     +L  G+FQ   DG+ V +   +     +   +F+++  
Sbjct: 121 APQGAMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETMTDDRANLGGVFISEKR 180

Query: 179 PRENTRP---SVVVADRGTVAARGDGSQVVTLNKGTRYEGTAMLRDFRITDFINYQAIVG 235
             ++ +    SV+VAD G    R DGS+ + L  G RY+G+  + D+R   +  Y  ++ 
Sbjct: 181 LGQDKKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVMLA 240

Query: 236 YQPIAVDPSNVEQMSLETLWQSADIAARAEFHWRLTLILSVLVMAVMVVPLSVVNPRQGR 295
              I+ + ++ + +    L+ S ++ + AE  WR++L L V ++ +M VPLS VNPRQGR
Sbjct: 241 RPDISDEVTDRDAIPTTELFGSKELRSIAELQWRISLPLLVFIVTLMAVPLSRVNPRQGR 300

Query: 296 VLSMLPAMLLYLVFFLLQSSLRSNASKGKLDPMVWMWLTNLAYLALAIILNLWDSVPARK 355
            L +LPA+LLY+ +  +  S R +  KGKL P + +W  +  +L + + L  W+ +    
Sbjct: 301 FLKLLPAILLYMAYLTILISARGSLEKGKLSPTLGLWWVHGIFLVIGLGLLYWEPI---- 356

Query: 356 MRASLKSGNRQK 367
            R  +KS   QK
Sbjct: 357 -RLKMKSRRGQK 367