Pairwise Alignments

Query, 457 a.a., PTS sucrose transporter subunit IIBC from Dickeya dianthicola ME23

Subject, 480 a.a., trehalose PTS system, EII-BC components TreB (from data) from Pseudomonas simiae WCS417

 Score =  337 bits (864), Expect = 5e-97
 Identities = 185/473 (39%), Positives = 287/473 (60%), Gaps = 27/473 (5%)

Query: 2   DIHATAASLIPLLGGRENIASAAHCATRLRLVLNDDSLADKTAIDNVEGVKGCFQNAGQM 61
           D    A  ++  LGG +N+  AAHC TRLRL L D SL + +A++ V+ VKG F   G  
Sbjct: 4   DYSTIAREILENLGGSDNLEQAAHCVTRLRLALKDPSLVNSSALNQVDLVKGSFFTGGLF 63

Query: 62  QIIFGSGLVNKVYAEFIKVAGISEASTSEAATLAAQKLNPLQRLARLLSNIFVPIIPAIV 121
           Q++ G G V KVYA   +  G++ A+ ++     A K N +QRL R+ S++F+PI+PA++
Sbjct: 64  QVVIGPGEVEKVYAALREQTGLAAATIADVKKKGADKTNAMQRLVRVFSDVFMPILPALI 123

Query: 122 ASGLLMG---LLG----------MIKTYDWVDAGSAIFVMLDMFSSAAFIILPILIGFTA 168
            +GLLMG   L+G          +++ Y  +D    ++ ++++ ++ +F+ LP L+G++A
Sbjct: 124 IAGLLMGVNNLMGAQGMFIEGKTLLEAYPNLD---GLWSLINLMANTSFVFLPALVGWSA 180

Query: 169 AREFGGNPYLGATLGGILTHPALTNAW----GVAG----GFKTMHLFG-LEFAMIGYQGT 219
           A+ FGG+  LG  LG +L HP L NAW     VAG          +FG  +   +GYQG 
Sbjct: 181 AKRFGGSEILGIVLGLMLVHPDLLNAWNYGKAVAGLDGQSLPYFDIFGWFKIEKVGYQGQ 240

Query: 220 VFPVLLAVWFMSLVEKRLRKVVPNALDIIVTPFLTVIISGFVAMLVIGPAGRMLGDGISL 279
           + P+L+A + MS++EK LR  VPNA+ ++V P  T++++G +A+ +IGP  R LG  I+ 
Sbjct: 241 ILPILMAAYVMSVIEKGLRARVPNAIQLLVVPITTIVVTGVLALAIIGPVTRHLGILITE 300

Query: 280 VLSTLIAHAGWLAGLLFGGLYSAIVITGVHHSFHAIEAGLLGNPSIGVNFLLPIWAMANV 339
            + TL   A  + G +FG LY+ +VITG+HH F A++  L+     G  F+ P+  M+N+
Sbjct: 301 GVVTLFDLAPMVGGAIFGLLYAPLVITGMHHMFLAVDLQLISTQ--GGTFIWPMIVMSNL 358

Query: 340 AQGGACLAVYFKTRDAKIRAIAVPSSLSCLLGITEAAIFGINLRFIKPFLAGLAGGALGG 399
           AQG A LAV++ TR+A+ +++A  S++S   GITE A+FG+NLRF  PF A L G ALG 
Sbjct: 359 AQGSAALAVFYTTRNARDKSMASTSAISAYFGITEPAMFGVNLRFKFPFYAALVGSALGS 418

Query: 400 AWVVANHVNMTAVGLTGIPGLAIVQSGSTLYYLIGMVIAFGAAFLLSLLLKYK 452
            ++  N V  +A+G+ G+PG   +   S   ++IGMVIA    F+L+  L  K
Sbjct: 419 IFLALNKVQASAIGVGGLPGFISIVPQSIAVFVIGMVIAMVVPFVLTCGLSMK 471