Pairwise Alignments

Query, 631 a.a., DNA topoisomerase IV subunit B from Dickeya dianthicola ME23

Subject, 635 a.a., DNA topoisomerase IV subunit B from Pseudomonas simiae WCS417

 Score =  924 bits (2387), Expect = 0.0
 Identities = 454/628 (72%), Positives = 534/628 (85%), Gaps = 3/628 (0%)

Query: 4   SSYNADAIEVLSGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHARRIDVILHPD 63
           SSYNADAIEVLSGL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAGHA+ + VILH D
Sbjct: 7   SSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHAKSVHVILHAD 66

Query: 64  QSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNAL 123
            SLEV DDGRGMPVDIHPEEGVP VELIL +LHAGGKFSNKNYQFSGGLHGVGISVVNAL
Sbjct: 67  HSLEVSDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNAL 126

Query: 124 STRVEVTVRRDGQVYDIAFENGDKVQDLTVTGTCGRRNTGTRVHFWPDVTFFDSPRFSVL 183
           ST V V V+RDG  Y + F +G K  DL V GT G+RNTGT V+F PD  +FDSP+FS+ 
Sbjct: 127 STLVRVKVKRDGNEYQMTFADGYKATDLEVIGTVGKRNTGTSVYFAPDPKYFDSPKFSIS 186

Query: 184 SLTHLLKAKAVLCPGVEIVFKDGVNDTEQRWCYQGGLSDYLCEAVNGLPTLPEKPFIGVI 243
            L H+LKAKAVLCPG+ + F+D     +  W Y+ GL  YL ++V+    LP +PF G +
Sbjct: 187 RLKHVLKAKAVLCPGLVVTFEDKGTGEKVEWHYEDGLRSYLEDSVSDFERLPNEPFCGSL 246

Query: 244 PGDTEAVEWALLWLPEGGELLTESYVNLIPTLQGGTHVNGLRQGLLDAMREFCEFRNILP 303
            G+ EAV+WALLWLPEGG+ + ESYVNLIPT QGGTHVNGLRQGLLDAMREFCE+RN+LP
Sbjct: 247 AGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEYRNLLP 306

Query: 304 RGVKLSAEDIWERCAYVLSLKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNQNV 363
           RGVKL+ ED+WER A+VLS+KMQ+PQF+GQTKERLSSR++AAFVSGVVKDAFSLWLN++ 
Sbjct: 307 RGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNEHP 366

Query: 364 QAAEQLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTLQDLNKTELFLVEGDSA 423
           +    LAE+AI++A RR++A+KKV RK++T GPALPGKLADC  QD  ++ELFLVEGDSA
Sbjct: 367 ELGLALAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFLVEGDSA 426

Query: 424 GGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRY 483
           GGSAKQARD+E+QAI+PL+GKILNTWEV   EVLASQEVH+I+VAIG+DP + D+SQLRY
Sbjct: 427 GGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAADMSQLRY 486

Query: 484 GKVCILADADSDGLHIATLLCALFVRHFRALVQGGHVHVAMPPLYRIDLGKEVYYALDEE 543
           GK+CILADADSDGLHIATLLCALFV+HFR LV+ GHV+VAMPPLYRIDLGKE+YYALDE 
Sbjct: 487 GKICILADADSDGLHIATLLCALFVQHFRPLVEAGHVYVAMPPLYRIDLGKEIYYALDEA 546

Query: 544 EKAGILEQL--KRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTINEQDIEQTL 601
           E+ GIL++L  ++K+GKP V RFKGLGEMNP QLRETT+DPNTRRLVQLT+ + D   T 
Sbjct: 547 ERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLGD-DFAATS 605

Query: 602 ATMDMLLAKKRAEDRRNWLQEKGDKAEL 629
             MDMLLAKKRA DR++WL+ KG+ AE+
Sbjct: 606 EMMDMLLAKKRAPDRKSWLESKGNLAEV 633