Pairwise Alignments

Query, 631 a.a., DNA topoisomerase IV subunit B from Dickeya dianthicola ME23

Subject, 634 a.a., DNA topoisomerase IV subunit B from Pseudomonas putida KT2440

 Score =  928 bits (2398), Expect = 0.0
 Identities = 456/630 (72%), Positives = 536/630 (85%), Gaps = 4/630 (0%)

Query: 4   SSYNADAIEVLSGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHARRIDVILHPD 63
           S+YNADAIEVLSGL+PVR+RPGMYTDT+RPNHL QEVIDNSVDEALAGHAR + VILH D
Sbjct: 7   SAYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHARSVQVILHAD 66

Query: 64  QSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNAL 123
            SLEV DDGRGMPVDIHPEEGV  VELIL +LHAGGKFSNKNYQFSGGLHGVGISVVNAL
Sbjct: 67  HSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGISVVNAL 126

Query: 124 STRVEVTVRRDGQVYDIAFENGDKVQDLTVTGTCGRRNTGTRVHFWPDVTFFDSPRFSVL 183
           ST+V V V+RDG  Y + F +G K  +L V G+ G+RNTGT V+F PD  +FDSP+FS+ 
Sbjct: 127 STQVRVRVKRDGNEYQMTFADGFKASELEVVGSVGKRNTGTSVYFSPDPKYFDSPKFSIS 186

Query: 184 SLTHLLKAKAVLCPGVEIVFKDGVNDTEQRWCYQGGLSDYLCEAVNGLPTLPEKPFIGVI 243
            L H+LKAKAVLCPG+ + F+D  +  +  W Y+ GL  YL ++VN    LP++PF G +
Sbjct: 187 RLKHVLKAKAVLCPGLLVSFEDKASGEKVEWHYEDGLRSYLVDSVNEFQRLPDEPFCGSL 246

Query: 244 PGDTEAVEWALLWLPEGGELLTESYVNLIPTLQGGTHVNGLRQGLLDAMREFCEFRNILP 303
            G+ EAV+WALLWLPEGG+ + ESYVNLIPT QGGTHVNGLRQGLLDAMREFCEFRN+LP
Sbjct: 247 AGNKEAVDWALLWLPEGGDSIQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLP 306

Query: 304 RGVKLSAEDIWERCAYVLSLKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSLWLNQNV 363
           RGVKL+ ED+WER  +VLS+KMQDPQF+GQTKERLSSR++AAFVSGVVKDAFSLWLN + 
Sbjct: 307 RGVKLAPEDVWERITFVLSMKMQDPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNAHP 366

Query: 364 QAAEQLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTLQDLNKTELFLVEGDSA 423
           +   QLAE+AIS+A RR++A+KKV RK++T GPALPGKLADC  QD  + ELFLVEGDSA
Sbjct: 367 ELGMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRAELFLVEGDSA 426

Query: 424 GGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRY 483
           GGSAKQARD+E+QAI+PL+GKILNTWEV   EVLASQEVH+I+VAIG+DP + DL+QLRY
Sbjct: 427 GGSAKQARDKEFQAILPLRGKILNTWEVDGGEVLASQEVHNIAVAIGVDPGATDLAQLRY 486

Query: 484 GKVCILADADSDGLHIATLLCALFVRHFRALVQGGHVHVAMPPLYRIDLGKEVYYALDEE 543
           GK+CILADADSDGLHIATLLCALFV+HFR LV+ GHV+VAMPPLYRIDLGKE+YYALDE 
Sbjct: 487 GKICILADADSDGLHIATLLCALFVQHFRTLVEAGHVYVAMPPLYRIDLGKEIYYALDEA 546

Query: 544 EKAGILEQL--KRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTINEQDIEQTL 601
           E+ GIL++L  ++K+GKP V RFKGLGEMNP QLRETT+DPNTRRLVQLT++  D+E T 
Sbjct: 547 ERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLD--DVEATC 604

Query: 602 ATMDMLLAKKRAEDRRNWLQEKGDKAELDV 631
             MD LLAKKRA DR++WL+ KG+ AE+ V
Sbjct: 605 ELMDKLLAKKRAGDRKSWLETKGNLAEVMV 634