Pairwise Alignments

Query, 631 a.a., DNA topoisomerase IV subunit B from Dickeya dianthicola ME23

Subject, 803 a.a., DNA gyrase, B subunit from Enterobacter asburiae PDN3

 Score =  374 bits (961), Expect = e-108
 Identities = 224/551 (40%), Positives = 324/551 (58%), Gaps = 14/551 (2%)

Query: 4   SSYNADAIEVLSGLEPVRRRPGMYT----DTTRPNHLGQEVIDNSVDEALAGHARRIDVI 59
           +SY++ +I+VL GL+ VR+RPGMY     D T  +H+  EV+DN++DEALAGH + I V 
Sbjct: 3   NSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIVVT 62

Query: 60  LHPDQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISV 119
           +H D S+ V DDGRG+P  IHPEEGV A E+I+  LHAGGKF + +Y+ SGGLHGVG+SV
Sbjct: 63  IHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122

Query: 120 VNALSTRVEVTVRRDGQVYDIAFENGDKVQDLTVTGTCGRRNTGTRVHFWPD-VTFFDSP 178
           VNALS ++E+ ++R+G+++   + +G     L VTG   +  TGT V FWP   TF +  
Sbjct: 123 VNALSQKLELVIQREGKIHRQLYTHGVPQAPLAVTGDTDK--TGTMVRFWPSHETFTNVT 180

Query: 179 RFSVLSLTHLLKAKAVLCPGVEIVFKDGVNDTEQRWCYQGGLSDYLCEAVNGLPTLPEKP 238
            F    L   L+  + L  GV I  KD  +  E  + Y+GG+  ++         +    
Sbjct: 181 EFEYDILAKRLRELSFLNSGVSIRLKDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI 240

Query: 239 FIGVIPGDTEAVEWALLWLPEGGELLTESYVNLIPTLQGGTHVNGLRQGLLDAMREFCEF 298
           F      D   VE AL W  +G +     + N IP   GGTH+ G R  +   +  + + 
Sbjct: 241 FYFSTEKDGIGVEVALQW-NDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDK 299

Query: 299 RNILPRG-VKLSAEDIWERCAYVLSLKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSL 357
                +  V  + +D  E    V+S+K+ DP+F+ QTK++L S +  + V   + +  S 
Sbjct: 300 EGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSE 359

Query: 358 WLNQNVQAAEQLAEMAISSAQRR--MRAAKKVVRKKLTSGPA-LPGKLADCTLQDLNKTE 414
           +L +N   A+ +    I +A+ R   R A+++ R+K     A LPGKLADC  +D   +E
Sbjct: 360 YLLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSE 419

Query: 415 LFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAI--GID 472
           L+LVEGDSAGGSAKQ R+R+ QAI+PLKGKILN  +   D++L+SQEV  +  A+  GI 
Sbjct: 420 LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG 479

Query: 473 PDSDDLSQLRYGKVCILADADSDGLHIATLLCALFVRHFRALVQGGHVHVAMPPLYRIDL 532
            D  +  +LRY  + I+ DAD DG HI TLL   F R    +V+ GHV++A PPLY++  
Sbjct: 480 RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKK 539

Query: 533 GKEVYYALDEE 543
           GK+  Y  D+E
Sbjct: 540 GKQEQYIKDDE 550



 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 561 VQRFKGLGEMNPMQLRETTLDPNTRRLVQLTINEQDIEQTLATMDMLLAKKRAEDRRNWL 620
           +QR+KGLGEMNP QL ETT+DP +RR++++T+ +      L T    L     E RR ++
Sbjct: 735 IQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFT---TLMGDAVEPRRAFI 791

Query: 621 QEKGDKA 627
           +E   KA
Sbjct: 792 EENALKA 798