Pairwise Alignments

Query, 631 a.a., DNA topoisomerase IV subunit B from Dickeya dianthicola ME23

Subject, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  412 bits (1059), Expect = e-119
 Identities = 244/646 (37%), Positives = 367/646 (56%), Gaps = 27/646 (4%)

Query: 6   YNADAIEVLSGLEPVRRRPGMYTDTTRP---NHLGQEVIDNSVDEALAGHARRIDVILHP 62
           Y+A  I++L GLE VR+RP MY         +HL  EV+DNS+DEALAGH   I V +  
Sbjct: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGVKGLHHLIWEVVDNSIDEALAGHCDTIHVTVLE 71

Query: 63  DQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNA 122
           D S++V D+GRG+P D+H +E   A+E+++  LHAGGKF    Y+ SGGLHGVG+S VNA
Sbjct: 72  DNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVNA 131

Query: 123 LSTRVEVTVRRDGQVYDIAFENGDKVQDLTVTGTCGRRNTGTRVHFWPDVTFFDSPRFSV 182
           LST ++ TV R+G+V++  +  G     +T  G   +R  GT +HF PD   F    +  
Sbjct: 132 LSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKR--GTIIHFVPDGDIFTVTEYKY 189

Query: 183 LSLTHLLKAKAVLCPGVEIVFKD------GVNDTEQRWCYQGGLSDYLCEAVNGLPTLPE 236
            ++ + L+  A L  GV I FKD        N     +  +GGL +++         + +
Sbjct: 190 ETIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQ 249

Query: 237 KPFIGVIPGDTEAVEWALLWLPEGGELLTESYVNLIPTLQGGTHVNGLRQGLLDAMREFC 296
           +P       +   V+ A+ +     E +  SYVN I T +GGTHV+G R+ L   ++ + 
Sbjct: 250 EPIYIESEKNAVPVQVAMSYNSSFSENVV-SYVNTINTYEGGTHVSGFRRALTRTLKGYA 308

Query: 297 EFRNILPR-GVKLSAEDIWERCAYVLSLKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAF 355
           +   +L +    +S +D  E    V+S+K+ +PQF GQTK +L + +  + V   V +  
Sbjct: 309 DKSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVL 368

Query: 356 SLWLNQNVQAAEQLAEMAISSAQRR---MRAAKKVVRKKLTSGPALPGKLADCTLQDLNK 412
             WL ++ + A+ +    + +AQ R    +A + V RK +  G  LPGKLADC   +   
Sbjct: 369 QYWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEV 428

Query: 413 TELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGI- 471
            EL+LVEGDSAGGSAKQ RDR++QAI+PLKGKILN  +    ++  + E+ +I  A+G+ 
Sbjct: 429 CELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVK 488

Query: 472 -----DPDSDDLSQLRYGKVCILADADSDGLHIATLLCALFVRHFRALVQGGHVHVAMPP 526
                D    DL+ LRY K+ I+ DAD DG HI TL+  LF R+ R+L++ G+V++A+PP
Sbjct: 489 FGTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPP 548

Query: 527 LYRIDLGKEVYYALDEEEKAGILEQL--KRKKGKPNVQRFKGLGEMNPMQLRETTLDPNT 584
           LY +  GK+  Y   E+E+  + +++    K     +QR+KGLGEMNP QL  TT+DP +
Sbjct: 549 LYLLKKGKDERYCWSEDERIKLTKEMAGDGKTDNVGIQRYKGLGEMNPEQLWTTTMDPES 608

Query: 585 RRLVQLTINEQDIEQTLATMDMLLAKKRAEDRRNWLQEKGDKAELD 630
           R L Q+TI        L +M   L       RR ++++    A++D
Sbjct: 609 RTLKQVTIESAAEADHLFSM---LMGDEVAPRREFIEKNAKYAKID 651