Pairwise Alignments

Query, 392 a.a., amino acid ABC transporter permease from Dickeya dianthicola ME23

Subject, 335 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  231 bits (588), Expect = 3e-65
 Identities = 138/370 (37%), Positives = 200/370 (54%), Gaps = 54/370 (14%)

Query: 20  AWLYQILAVVIVVVTVGYLLHNTVTNLAQRGITSGFAFLNNSAGFGIVQHLIDYEQGDTY 79
           AW  Q+L V+ VV    +++H+ +  L  RG+ SGF FL   AGF I +  +D++    +
Sbjct: 16  AWAVQVLLVLAVVAGAVWVVHHALEVLRARGVRSGFDFLTEPAGFSISEGWLDFDASQPF 75

Query: 80  ARVFVVGLLNTLLVSVICIVCASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLLQI 139
            R F+ GL+NT+  +V   + + +LG ++G+ RL+ + LLR + T Y+E  RN+P L+Q+
Sbjct: 76  WRAFLAGLINTVRAAVPAAIFSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNVPLLVQL 135

Query: 140 FFWYFAVLRNLPGPRQAVNALDTFFLSNRGLYIPAAEFGPGAFASILALIITLVVAAVIF 199
               FA+   LP P + V+ L   +LS  GL +P      G +                 
Sbjct: 136 LMLAFAMANLLPDPTEPVHLLPGVWLSKGGLSVPWPVAAEGGW----------------- 178

Query: 200 RRNKSYHAFTGQQRRSWPILLAVLVTLLGLSHLIFGRALHWDVPVLKGFNFSGGLVLIPE 259
                           WP                     H++ P    F  SGG  L PE
Sbjct: 179 ----------------WPT--------------------HFEWPERGNFGVSGGAALSPE 202

Query: 260 LAALALALSVYTSSFIAEIIRSGIQSVSYGQHEAALSLGLPKPVTLRKVILPQALRVIIP 319
              +   L+ Y+++F+AEI+R+GI SVS GQ  A  +LGL     LR VILPQALRVI+P
Sbjct: 203 YVTIVAGLTFYSAAFVAEIVRAGILSVSQGQVLAGQALGLSSGQQLRIVILPQALRVIVP 262

Query: 320 PLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLL 379
            LT+Q L++ KNSSLA A+GYP++VS+ A T +   G+A E IAI M+VYL++SLLIS  
Sbjct: 263 SLTNQLLSLTKNSSLAVAVGYPELVSV-ANTTIGSNGRAFECIAIIMAVYLLLSLLISFG 321

Query: 380 MNIYNRKIAL 389
           MN YN ++AL
Sbjct: 322 MNRYNARVAL 331