Pairwise Alignments

Query, 299 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  195 bits (496), Expect = 8e-55
 Identities = 103/266 (38%), Positives = 159/266 (59%), Gaps = 2/266 (0%)

Query: 35  MALASGGFVL-LLVLVAVFAPWLAPWNPMEPDWAALGEAPSASHWMGADDLGRDVMSRII 93
           M  A GG +L  + L A    +  P++P+   +A    AP A HW+G D+ GRDV+SR++
Sbjct: 6   MNAAIGGTILGAIALAAGIGLFWTPFDPVTLGYAKRLAAPDAVHWLGTDEFGRDVLSRLM 65

Query: 94  YGARISLYIGVVSVTLGMLAGIVLGLLAGYYGRGIDMLIMRGCDVLFAFPGMLLAIAVVA 153
             A  S  I V++V   +L G ++G+L+GY     D ++M   D L AFPG+LLA+  +A
Sbjct: 66  TAAATSARISVLTVATAVLLGTLVGVLSGYLRGWTDRVLMAFNDALLAFPGILLALGFLA 125

Query: 154 ILGPGLNNVIIAVAVFSVPVFARIVRASTLSLKQAAYVEAVRCAGAPDRVILLRHILPGT 213
           + G     +++A+ +   P  ARIVR + +SL++  Y+ A R  G  +  I+ RH+LP  
Sbjct: 126 VAGANEYGIVVALGIAYAPSVARIVRGTVMSLREMDYIAASRLMGNSEFFIVWRHVLPNC 185

Query: 214 LSNVIVYFTMRIGTSILTAAGLSFIGLGPEPDVPEWGNILAMSRSMMMAGQWHVSVFPGL 273
           ++ ++V  T   G ++L  + LSF+GLG  P  P WGN+LA SR  +    W +++FPG 
Sbjct: 186 VAPLVVLATSMFGWALLAESALSFLGLGVPPPAPTWGNMLAGSRPFIAKAVW-LAIFPGA 244

Query: 274 AIFCTVLAFNLLGDALRDTLDPKLKS 299
            I  T+L  NLLGDALRD LDP++++
Sbjct: 245 CISLTLLGINLLGDALRDRLDPRMRN 270