Pairwise Alignments

Query, 299 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

Subject, 315 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  190 bits (483), Expect = 3e-53
 Identities = 110/296 (37%), Positives = 164/296 (55%), Gaps = 25/296 (8%)

Query: 25  DFLHAFIRNPMALASGGFVLLLVLVAVFAPWLAPWNPME------------PDWAALGEA 72
           D   +F R+  A  S   + +L+L A+FAPW+AP NP +            P W   GE 
Sbjct: 23  DLYWSFSRSKSAKISALVLAILILAAIFAPWIAPQNPYDGASLDMWKAELPPIWQEGGEW 82

Query: 73  PSASHWMGADDLGRDVMSRIIYGARISLYIGVVSVTLGMLAGIVLGLLAGYYGRGIDMLI 132
           P     +G D  GRD++S I+YG RIS+ IGV SV L ++ G+  GL+AGY+G   D L+
Sbjct: 83  PFL---LGTDTQGRDMLSAILYGTRISIVIGVASVVLSLVIGMTAGLVAGYFGGFADGLL 139

Query: 133 MRGCDVLFAFPGMLLAIAVVAILGPGLNN----------VIIAVAVFSVPVFARIVRAST 182
           MR  D+  + P +L+AI V  ++   L +          +I+A+A+ +   +AR VRA  
Sbjct: 140 MRIGDITLSIPTILVAILVSTVVRQMLPDSLREVGASAVLILAIALSAWVQYARTVRAQA 199

Query: 183 LSLKQAAYVEAVRCAGAPDRVILLRHILPGTLSNVIVYFTMRIGTSILTAAGLSFIGLGP 242
           +      YV+A +  G P R I+  HILP TL+ ++V  T+  G +ILT A LSF+G+G 
Sbjct: 200 IVETGKDYVQAAKLIGVPARRIMAAHILPNTLTPIMVAATLNFGMAILTEATLSFLGIGM 259

Query: 243 EPDVPEWGNILAMSRSMMMAGQWHVSVFPGLAIFCTVLAFNLLGDALRDTLDPKLK 298
            P  P  G ++ +    + +G W + +FP   +   V+  NLLGD LRD L+PKL+
Sbjct: 260 PPSQPSLGTLIRIGNQFLFSGSWWIVLFPVFQLCLLVVTVNLLGDWLRDALNPKLR 315