Pairwise Alignments

Query, 628 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

Subject, 544 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  341 bits (874), Expect = 6e-98
 Identities = 208/462 (45%), Positives = 296/462 (64%), Gaps = 20/462 (4%)

Query: 163 STLHQKLVTVRYLVRGL--LLSLNSDAEKPLVTALDDAQAALN----QFIQALT-PEQQA 215
           S L  K +  RY  + L  +L+ + D       A+D+  A L     ++ + ++ PE++ 
Sbjct: 23  SLLEMKNLMSRYRTQELQHILAGSYDEMAVYEKAMDETWANLQKNRAEYEKLISEPEERE 82

Query: 216 IMAPVVSTLSTYKTQ---VLAYLPAYQMEM------NQAKQLGETANQLIDNVDKMVYEE 266
           I   +   L+ Y  +   ++A     + E        ++ QL    N  +D + ++    
Sbjct: 83  IYPTLQKLLTEYSLEHNKIVAISHTQENEQATALIRGKSLQLSRDINGALDKLTEVNVAG 142

Query: 267 T--AATQNDITNAEWQIAITALI--TLVLGALIAWYISRQITHPLNNTVAIAESIATGDL 322
              A    D    E ++ +  L+  ++ LG ++A +I+R ++ PL+  V +A+S+A GDL
Sbjct: 143 AIRAGETADTVYGEARLWVLGLLLGSVALGLVLALWIARIVSRPLSEAVKVAQSVAAGDL 202

Query: 323 TISIETTRRDELGMLFGAMAKMKANLHNMIDDIRMGVSQITTAASEIVTGNNDLAARTES 382
           T  IE    DE G+L  A+  M  +L  ++ ++R+G   I TA+S+I +GN DL++RTE 
Sbjct: 203 TSHIEARTTDETGLLLEALKGMNDSLAKIVGEVRIGTDTIATASSQIASGNQDLSSRTEE 262

Query: 383 QAASVEETAASMEQLTSTVKQNAANAHQANKLVLEATQTAQEGGKLVADVVQTMTDIEGS 442
           QA+S+E+TAASME+LTSTVKQNA NA QAN+L + A++ A +GG +V+ VV TM  I  S
Sbjct: 263 QASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTMGSINAS 322

Query: 443 SKRIAEITSVINSIAFQTNILALNAAVEAARAGEQGRGFAVVANEVRNLAQRSSQAAKEI 502
           SK+I +I  VI+ IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRS+ AAKEI
Sbjct: 323 SKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEI 382

Query: 503 EGLISTSVSQVSKGAHLVHNAGKTMQEIVTAVTHVHDIMGEITVASDEQSRGIAQVNQAI 562
           + LI  SV +V +G+  V  AG+TM EIV +V  V DIMGEIT AS EQ+ GI Q+NQAI
Sbjct: 383 KTLIGDSVEKVEEGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAI 442

Query: 563 VEMDSTTQQNAALVQQSSAAASSLEEQAVMLSNTVSAFRLSS 604
            +MD  TQQNAALV+++SAAA SL+EQA  L  +VS F+L +
Sbjct: 443 TQMDQVTQQNAALVEEASAAAQSLQEQAGSLVQSVSIFKLDA 484