Pairwise Alignments

Query, 628 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

Subject, 520 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Variovorax sp. SCN45

 Score =  357 bits (917), Expect = e-103
 Identities = 235/609 (38%), Positives = 338/609 (55%), Gaps = 98/609 (16%)

Query: 3   LKFENIKVGRKLGLGFSLILLLTVIIAAVSVRYIETLQGRFEKVIFSNKINDEVNEARYY 62
           L   N+++G +LGLGF+L+LLL ++I  + +R +  L    E++ F+ ++          
Sbjct: 2   LDLSNLRIGARLGLGFALLLLLQLVITGIGLREMAHLS---ERIAFATEVGQ-------- 50

Query: 63  RVLYSISYNPDSIQQNTKHIDNIINLISSIQDKSWRGDYNDKLDNIAKLISQYKERQKNY 122
                            + +D + N+ S+I  ++          N+A +           
Sbjct: 51  -----------------RKLDELNNVQSAIGKRAIAAR------NLALV----------- 76

Query: 123 TDAIAKKDDVR----KSWNLSDSEKPLKQIEQQVAGNLPLQLQ----LSTLHQKLVTVRY 174
           +D+ A+K D+         +    + L  +    A + P + Q    L  L  + + +  
Sbjct: 77  SDSAAQKGDIELVGSSQREIDGGLQSLATVMADPAASTPEERQMLEKLRALEAQYLPIAK 136

Query: 175 LVRGLLLSLNSDAEKPLVTALDDAQAALNQFIQALTPEQQAIMAPVVSTLSTYKTQVLAY 234
            V GL  S  +DA                  ++ LT E   ++            QVLA+
Sbjct: 137 NVVGLATSHQTDAA-----------------VKVLTQECMPLL-----------NQVLAH 168

Query: 235 LPAYQMEMNQAKQLGETANQLIDNVDKMVYEETAATQNDITNAEWQIAITALITLVLGAL 294
           + A+Q ++ ++                   E TA+TQ     A+W I   +  +LV G L
Sbjct: 169 VAAFQAQLKKSAD-----------------ESTASTQAAYQRAKWMIVWISCASLVGGLL 211

Query: 295 IAWYISRQITHPLNNTVAIAESIATGDLTISIETTRRDELGMLFGAMAKMKANLHNMIDD 354
           +A+ ++R IT PL   V +A+ +A+GDLT  IE     E GML  A+  M   L  ++  
Sbjct: 212 LAFRMTRSITRPLGQAVTVAQQVASGDLTARIEVGDSSESGMLMRALRSMNDELAKVVGQ 271

Query: 355 IRMGVSQITTAASEIVTGNNDLAARTESQAASVEETAASMEQLTSTVKQNAANAHQANKL 414
           +R G   I TA+S+I +GN DL++RTE+QA+S+E+TAASM++LTSTVKQNA NA  AN+L
Sbjct: 272 VRDGTDSIATASSQIASGNRDLSSRTEAQASSLEQTAASMQELTSTVKQNADNARLANQL 331

Query: 415 VLEATQTAQEGGKLVADVVQTMTDIEGSSKRIAEITSVINSIAFQTNILALNAAVEAARA 474
              A+Q A  GG +V  VV+ M  I  SS+++ EI  VI+ I+FQTNILALNAAVEAARA
Sbjct: 332 ADSASQVASRGGAVVDQVVEKMASINASSRKVVEIIGVIDGISFQTNILALNAAVEAARA 391

Query: 475 GEQGRGFAVVANEVRNLAQRSSQAAKEIEGLISTSVSQVSKGAHLVHNAGKTMQEIVTAV 534
           GEQGRGFAVVA+EVR+LAQRS+ AAKEI+ LI  SV +V  G+ LV+ AGKTM+EI+ +V
Sbjct: 392 GEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVDEVDAGSTLVNEAGKTMEEIMGSV 451

Query: 535 THVHDIMGEITVASDEQSRGIAQVNQAIVEMDSTTQQNAALVQQSSAAASSLEEQAVMLS 594
             V DIM EIT AS EQS GI QVN AI +MD TTQQNAALV+Q+SAAA S+ +QA  L 
Sbjct: 452 RRVTDIMAEITAASQEQSAGIEQVNDAIKQMDRTTQQNAALVEQASAAAQSMNDQAAGLV 511

Query: 595 NTVSAFRLS 603
           + V  F+L+
Sbjct: 512 HAVRMFKLA 520