Pairwise Alignments

Query, 294 a.a., small-conductance mechanosensitive channel MscS from Dickeya dianthicola 67-19

Subject, 286 a.a., mechanosensitive channel protein, small conductance from Escherichia coli BL21

 Score =  374 bits (959), Expect = e-108
 Identities = 193/276 (69%), Positives = 227/276 (82%)

Query: 1   MEELNVAESMGRLQSWLVNNQHILLQYAVNIVASMVILCVGMIVARMMSNTMSRLMVARG 60
           ME+LNV +S+    SWLV NQ +LL YAVNIVA++ I+ VG+I+ARM+SN ++RLM++R 
Sbjct: 1   MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK 60

Query: 61  IDVTVADFLSALVRYGIIAFTLIAALSRVGVQTTSVIAVLGAAGLAVGLALQGSLSNFAA 120
           ID TVADFLSALVRYGIIAFTLIAAL RVGVQT SVIAVLGAAGLAVGLALQGSLSN AA
Sbjct: 61  IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA 120

Query: 121 GVLLVVFRPFRTGESVDLGGVAGTVTQVQIFSTTLLTADGKVIVVPNGKIIAGNITNSSR 180
           GVLLV+FRPFR GE VDLGGVAGTV  VQIFSTT+ TADGK+IV+PNGKIIAGNI N SR
Sbjct: 121 GVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSR 180

Query: 181 EPDCRTEIIVGVAYDADIDVVKKVLGDIVAADTRIQHDKGVTIRLNEMGAYSLNFVVRVW 240
           EP  R E I+GVAYD+DID VK++L +I+ ++ RI  D+ +T+RLNE+GA S+NFVVRVW
Sbjct: 181 EPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVW 240

Query: 241 SANGDAAAVNWDLLESFKRALDEHRIGIPYPQMDVH 276
           S +GD   V WD+LE  KR  D   I  PYPQMDV+
Sbjct: 241 SNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN 276