Pairwise Alignments

Query, 1158 a.a., exodeoxyribonuclease V subunit gamma from Dickeya dianthicola 67-19

Subject, 1160 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit from Pseudomonas putida KT2440

 Score = 1176 bits (3042), Expect = 0.0
 Identities = 633/1156 (54%), Positives = 762/1156 (65%), Gaps = 36/1156 (3%)

Query: 6    LQPGLMAIHSNHPEALRNVLVSWMAANPLGGLENELILVQSNGIGQWLKLALARDPRD-- 63
            L PG M +H N  + LR+++VSWM   PL  LENE+ LVQSNGI QWLKLALA DP +  
Sbjct: 7    LHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAEDPLEDD 66

Query: 64   -GGCGVAAALDIQLPSRFFWQVYRSVLGNEQVPETSPFDKSLLVWRLVRLLPELLAQPEF 122
             GGCG+AAA+D+QLP  F WQ+YRSVLG  ++PE S  DK+ L WRL+RLLP L+ +P F
Sbjct: 67   QGGCGIAAAIDVQLPGSFMWQLYRSVLGRSEIPEVSLLDKAPLTWRLMRLLPALIERPHF 126

Query: 123  AALARFLQQDADLRKRYQLAERLADLFDQYQVYRADWLAQWAAGQDVLATSRRGVEPLPE 182
              L RFL  D+DLRKRYQLAERLADLFDQYQVYRADWL  WA G+ V+ T+R   + LP 
Sbjct: 127  EPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWATGEHVINTARGERKVLPP 186

Query: 183  DQRWQPLLWRALLRDTGEALSGTSRAALHRRFLDDVQRRGDADRPAGLPSRVMVFGISSL 242
              RWQ  LWRALL D GE     SRA +H+RF++ +     A  PAGLP RV+VFGISSL
Sbjct: 187  GNRWQAELWRALLEDVGEQGMAQSRAGVHQRFIERINSLEQA--PAGLPPRVIVFGISSL 244

Query: 243  PQQALELLAAIGRWTQIFMCVHNPCQYYWGDIIADKDLLRAERARQRRKPGMPDVLALEE 302
            P QALE LA + R++Q+ +CVHNPC+++W DI+ADKDLLR +  RQ+RK GMP  L  + 
Sbjct: 245  PAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLQLDDQT 304

Query: 303  LHQHAHPLLAAWGKQGRDYIGLLDEYDQSEHYSSLIE--RRDLFFSNGNDCLLHHLQDDI 360
            LHQHAHPLLAAWGKQGRDYI LLD YD    Y  +    R DLF       LL+ LQDDI
Sbjct: 305  LHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSDGSPTTLLNELQDDI 364

Query: 361  LDLRPLAESRARWPAVDPHQDRSIRFHVAHSAQREMEVLHDQLLAAFAADPTLRPRDVIV 420
            L+LRPLAESR RWPAVD  +DRSIRFH+AHS QRE+E+LHDQLLA F+ADPTLRPRDVIV
Sbjct: 365  LELRPLAESRERWPAVDTTKDRSIRFHIAHSPQREVEILHDQLLARFSADPTLRPRDVIV 424

Query: 421  MVPDINGYAPHIQAVFGLIDRQDPRYIPFSVADRGPRQNNLLLAALERLLNLPQSRVAVS 480
            M+PDI+ YAPHI+AVFG + R DPRYIPF++ D+G R    LL ALE LL LP SR AVS
Sbjct: 425  MLPDIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIALEHLLKLPDSRFAVS 484

Query: 481  DVLDLLEVPAVRQRFAIAEEQLPLLQRWIRAANVRWGLHARQRQSLDLPDAPEQNSWFFG 540
            +VLDLL+VPAVR RF I E  LP L RWI  A +RWGL A QR SL LP   EQNSW FG
Sbjct: 485  EVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLDAAQRASLGLPAGLEQNSWRFG 544

Query: 541  LRRMLLGYAVGAGDAWRDIEPLDEIGGLDAVLAGQLALLLDRLDYSWQQLCQPATPAQWG 600
            LRRMLLGYAVG G+A   IEP DEIGGLDA L G L  LLD L+ + Q L +PAT +QWG
Sbjct: 545  LRRMLLGYAVGVGEACDGIEPYDEIGGLDAALIGPLVALLDALEVACQALSEPATVSQWG 604

Query: 601  ERLRALLGTFFAADEGEDGFMLLQLDEGLQNWLEACESVALEQSLPLSVVREHWLGLFEQ 660
            ERL ALL  FF A++  D F+L+QL +   +WLE CE+V L   LPL+VVRE WL   +Q
Sbjct: 605  ERLHALLHVFFLAEDEGDEFLLMQLQDLRDSWLEVCETVGLHDPLPLTVVREAWLSGLDQ 664

Query: 661  SSLTQPFFAGSVTFATLMPMRAIPFRHVCLLGMNDGDYPRNRVPLDFDLMGQDYRPGDRS 720
              L+Q F AGSV F TLMPMRAIPFR VCLLGMNDGDYPR + PLDFDLM  DYRPGDRS
Sbjct: 665  GKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQPPLDFDLMASDYRPGDRS 724

Query: 721  RREDDRYLFLEALLSARERLYLSWVGRSIHDNSERPPSVLVAQLRDHLSNGWRTAD---- 776
            RREDDRYL LEALLSAR++LY+SWVGRSI DNSERP SVL+ QLRDH++ GW  AD    
Sbjct: 725  RREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHIAAGWHLADAQQG 784

Query: 777  -----GQDVLPALTMEHRLQPFSPDYFTAGSPLFSYAREWRAGLLPQHAPA---TDAALD 828
                 G+ +L ALT EH LQPFSP YF  GSPLFSYA EW+  +L Q       ++  L 
Sbjct: 785  QPARPGEQLLHALTQEHPLQPFSPRYFQKGSPLFSYAHEWQ--VLHQQGETDAQSEPGLP 842

Query: 829  EYRQDGVLTLRQLADFARDPVRSFFRLRLNVWFEQEDATSQDQEPFAIDALENWRLQHEL 888
             Y+    L+L QL DF R PVR FF  RL V+FE  +A + D+EPF +D L+ +     L
Sbjct: 843  PYQDAEALSLHQLNDFLRHPVRHFFSQRLKVYFEALEAPTPDEEPFVLDTLQRYGASESL 902

Query: 889  IQVQKAALHQRIPREQALTEQLARIARRGELAPGGFTAVLEQDLAEPMADLFTRYEQERE 948
            +    AAL +    EQAL  Q  R+   G L   GF  +L+ +L EP+ DL  R++Q  +
Sbjct: 903  L---GAALAEPDNAEQALRAQARRLQACGLLPLAGFGELLQNELIEPLPDLLQRHQQLLQ 959

Query: 949  TWP---EPAPDEPLSLPDLPLEDWLNELRTDAQGNRCRLVLESGGLLHPTRRSYRLDKLL 1005
             WP   E A           LE WL  +   A+      +      +   R + +  +L+
Sbjct: 960  RWPQLVEGALPVHFEHGQHRLEGWLGRV-FQAEDQSLLSITTVPNTISAGRNNLKWHRLI 1018

Query: 1006 PFWVAHLAGHLGGQPLHSTLVSKNGTVYLPALEPEQAKAYWQALIDAWREGMRYPLPLAV 1065
              WV HLA    G P +S LV+ + T+ L  L   QA      L+ A +  M  PLP+A 
Sbjct: 1019 APWVTHLAACAAGYPYNSALVASDLTLLLAPLPQAQAAQLLGDLLVARQAAMNAPLPVAA 1078

Query: 1066 KTGFRWLEAGGAPEQPPDGEAGNAARQCYEEHDPANRKFAELASNAYLARAFPNFDQLWA 1125
            KT F WL       Q    +A  AA + YE  +     F E + +  LAR F +F  L A
Sbjct: 1079 KTAFAWL------AQDDADKALAAAARAYEGDE--RTSFGERSESIALARQFRDFAALTA 1130

Query: 1126 NGEFARWAQQLLAPLY 1141
            +  F  W + L  PL+
Sbjct: 1131 DETFEGWCETLYRPLF 1146