Pairwise Alignments

Query, 1158 a.a., exodeoxyribonuclease V subunit gamma from Dickeya dianthicola 67-19

Subject, 1122 a.a., exonuclease V (RecBCD complex), gamma chain from Escherichia coli BL21

 Score =  624 bits (1609), Expect = 0.0
 Identities = 424/1107 (38%), Positives = 587/1107 (53%), Gaps = 104/1107 (9%)

Query: 10   LMAIHSNHPEALRNVLVSWMAANPLGG-LENELILVQSNGIGQWLKLALARDPRDGGCGV 68
            L   HSN  + L  ++   +    L    E E+ILVQS G+ QWL++ L++       G+
Sbjct: 2    LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-----FGI 56

Query: 69   AAALDIQLPSRFFWQVYRSVLGNEQVPETSPFDKSLLVWRLVRLLPELLAQPEFAALARF 128
            AA +D  LP+ F W ++  VL   ++P+ S F+K  + W+L+ LLP+LL + +F  L  +
Sbjct: 57   AANIDFPLPASFIWDMFVRVL--PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114

Query: 129  LQQDADLRKRYQLAERLADLFDQYQVYRADWLAQWAAGQDVLATSRRGVEPLPEDQRWQP 188
            L  D+D RK +QL+ + ADLFDQY VYR +WLAQW  G  V        E L E Q WQ 
Sbjct: 115  LTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLV--------EGLGEAQAWQA 166

Query: 189  LLWRALLRDTGE-ALSGTSRAALHRRFLDDVQRRGDADRPAGLPSRVMVFGISSLPQQAL 247
             LW+AL+  T E       RA L++RF++ ++       P GLPSRV + GIS+LP   L
Sbjct: 167  PLWKALVEYTHELGQPRWHRANLYQRFIETLESATTC--PPGLPSRVFICGISALPPVYL 224

Query: 248  ELLAAIGRWTQIFMCVHNPCQYYWGDIIADKDLLRAERARQRRKPGMPDVLALEELHQHA 307
            + L A+G+  +I +   NPC+YYWGDI  D   L     RQRR       L L    ++A
Sbjct: 225  QALQALGKHIEIHLLFTNPCRYYWGDI-KDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283

Query: 308  -------------HPLLAAWGKQGRDYIGLLDEYDQSEHYSSLIERRDLFFSNGNDCLLH 354
                         +PLLA+WGK GRDYI LL + + S+         D F     D LLH
Sbjct: 284  GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL-------DAFVDVTPDNLLH 336

Query: 355  HLQDDILDLRPLA----------ESRARWPAVDPHQDRSIRFHVAHSAQREMEVLHDQLL 404
            ++Q DIL+L   A           S  + P +DP  D SI FHV HS QRE+EVLHD+LL
Sbjct: 337  NIQSDILELENRAVAGVNIEEFSRSDNKRP-LDP-LDSSITFHVCHSPQREVEVLHDRLL 394

Query: 405  AAFAADPTLRPRDVIVMVPDINGYAPHIQAVFGLIDRQDPRYIPFSVADRGPRQNNLLLA 464
            A    DPTL PRD+IVMV DI+ Y+P IQAVFG       RY+P++++DR  RQ++ +L 
Sbjct: 395  AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLE 452

Query: 465  ALERLLNLPQSRVAVSDVLDLLEVPAVRQRFAIAEEQLPLLQRWIRAANVRWGLHARQRQ 524
            A   LL+LP SR    DVL LL+VP +  RF I EE L  L++W+  + +RWG+     +
Sbjct: 453  AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512

Query: 525  SLDLPDAPEQNSWFFGLRRMLLGYAV-GAGDAWRDIEPLDEIGGLDAVLAGQLALLLDRL 583
             L+LP A  Q++W FGL RMLLGYA+  A   W+ + P DE  GL A L G LA LL +L
Sbjct: 513  ELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571

Query: 584  DYSWQQLCQPATPAQWGERLRALLGTFFAADEGEDGFMLLQLDEGLQNWLEACESVALEQ 643
            +   + L Q     +W    R +L  FF  D   +  M L +++  Q  +          
Sbjct: 572  NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQYGD 630

Query: 644  SLPLSVVREHWLGLFEQSSLTQPFFAGSVTFATLMPMRAIPFRHVCLLGMNDGDYPRNRV 703
            ++PLS++R+      +Q  ++Q F AG V   TLMPMR+IPF+ VCLLGMNDG YPR   
Sbjct: 631  AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690

Query: 704  PLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYLSWVGRSIHDNSERPPSVLVAQ 763
            PL FDLM Q  + GDRSRR+DDRYLFLEAL+SA+++LY+S++GRSI DNSER PSVLV +
Sbjct: 691  PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750

Query: 764  LRDHLSNGWRTADGQDVLPA----------LTMEHRLQPFSPDYFTAGSPLFSYAREWRA 813
            L D++        G + L            LT  H   PF P  +  G    SYAREW  
Sbjct: 751  LIDYIGQS-HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ-SYAREW-- 806

Query: 814  GLLPQHAPATDAALD-----EYRQDGVLTLRQLADFARDPVRSFFRLRLNVWFEQEDATS 868
              LP  + A  A  +      +     + L  L  F   PVR+FF++RL V F  ED+  
Sbjct: 807  --LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864

Query: 869  QDQEPFAIDALENWRLQHELIQVQKAALHQRIPREQALTEQLARIAR-RGELAPGGFTAV 927
             D EPF ++ L  +++  +L+             EQ   E+L R  R  G+L  G F  +
Sbjct: 865  PDTEPFILEGLSRYQINQQLLNALV---------EQDDAERLFRRFRAAGDLPYGAFGEI 915

Query: 928  LEQDLAEPMADLFTRYEQERETWPEPAPDEPLSLPDLPLEDWLNELRTDAQGNRCRLVLE 987
              +   + M  L  R    R+  P  + +  L+   + +  WL +++ D           
Sbjct: 916  FWETQCQEMQQLADRVIACRQ--PGQSMEIDLACNGVQITGWLPQVQPD----------- 962

Query: 988  SGGLLHPTRRSYRLDKLLPFWVAHLAGHLGGQPLHSTL-VSKNGTVYLPALEPEQAKAYW 1046
              GLL        + + +  W+ HL     G    S L + K+G    P L  EQA  Y 
Sbjct: 963  --GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020

Query: 1047 QALIDAWREGMRYPLPLAVKTGFRWLE 1073
              LI+ +REGM  PL +  ++G  WL+
Sbjct: 1021 SQLIEGYREGMSAPLLVLPESGGAWLK 1047