Pairwise Alignments

Query, 1227 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola 67-19

Subject, 1224 a.a., exodeoxyribonuclease V subunit beta from Pseudomonas simiae WCS417

 Score = 1230 bits (3182), Expect = 0.0
 Identities = 672/1228 (54%), Positives = 824/1228 (67%), Gaps = 45/1228 (3%)

Query: 13   LRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGG-EQAFSRPLNPPDILVVTFTDAAT 71
            L FPL GS+LIEASAGTGKTFTI+ LY+RLVLGHGG E +F R L PP ILVVTFTDAAT
Sbjct: 8    LAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDESSFGRELLPPQILVVTFTDAAT 67

Query: 72   RELRDRIRARLAQAAGYFQPDGKDDKEDEADPLLRALRADYPPEQWPACARKLQLAAEWM 131
            +ELR+RIR RLA+AA +F+     ++ ++ D L+  LRADY PEQWPACA +L +AA+WM
Sbjct: 68   KELRERIRIRLAEAARFFR-----EEIEQPDALIADLRADYLPEQWPACANRLDIAAQWM 122

Query: 132  DEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRTFFFPLDARDVL 191
            DEAAVSTIH WC RML EHAFDSGSLF QTLETD SD+L EV+RDYWR F +P+    + 
Sbjct: 123  DEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHDDALN 182

Query: 192  ELRDSWPSPEHFYRSVTPLLEYADEIGIDDL--PAQIFSAVREEKTCRLAALKAPWPQWC 249
             +R  W  P      V  L  +  E   D+   PA++ +A  +E+   L  LKAPW QW 
Sbjct: 183  WVRSHWGGPAALMPRVRAL--FGSERPTDETREPAELITACLQERREALTTLKAPWQQWA 240

Query: 250  GELRDVLNAAVAQKKADGRKLQARYFESWLDKLHLWATSDETT--LDIGTGWTRLTPQGL 307
             ELRD+   AVA K  DGRK+QARYFE W +K+  WA +DET   LDIGTG+TRLTP G+
Sbjct: 241  TELRDICLQAVAAKAVDGRKMQARYFEPWFEKISAWA-ADETLEQLDIGTGFTRLTPDGM 299

Query: 308  RECWKVPEETPQHPALTAMEALQQQLSDLPEPRSHLLRHACRWVSRRFRHEQESRAQMGF 367
             E WK   E PQHP + AM  L+  L  LP P + +L+HA  WV +RF  E+  RA+MGF
Sbjct: 300  AEAWK--GEPPQHPGIDAMAGLKAALDALPTPDAAVLQHAAGWVGKRFEEEKRRRAEMGF 357

Query: 368  QDLLTRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTLYRVADNDPQQG 427
             D+L RL+AAL+ D GERLA  +R QFPVA+IDEFQDTDP+QY IFD++YR+ +N    G
Sbjct: 358  DDMLIRLNAALQADGGERLASVVREQFPVALIDEFQDTDPVQYSIFDSIYRIEENHLDSG 417

Query: 428  LILIGDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQAMVGAVNQVFMQAENR 487
            L LIGDPKQAIYAFRGADIYTYLRAR+ T GRH+TLGTNFRS+ AMV AVN VF +AE  
Sbjct: 418  LFLIGDPKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVNHVFQRAET- 476

Query: 488  ADGAGAFLFRQPDGGNPVPFLPVQANGRDEAWILEGADAAALTCWTLATDEPLSSAEYRQ 547
              G GAFLFR+PDG NPVPF  V + GR E   ++G    A+  W L TD+P+S+  YRQ
Sbjct: 477  --GRGAFLFREPDGVNPVPFHSVLSQGRKEQLQVDGQTLPAMNLWHLPTDQPVSNVIYRQ 534

Query: 548  RMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAMAVRAQLSARG 607
            ++AA CA  +V LL  G QG AGF  P  + + VRP D+A+LV  G+EA AVR +L+ARG
Sbjct: 535  QLAAACATHIVELLNGGQQGSAGFLQPDGSFKGVRPSDIAILVRDGKEAQAVRGELAARG 594

Query: 608  VRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALGTPLLGLSWQALDRLNHDE 667
            VRSVYLSD++SVF + +A +L  WL ACA+P+ +R LRAAL    L LS   L+RLN DE
Sbjct: 595  VRSVYLSDKDSVFAAQEAHDLLAWLKACAEPDVERPLRAALACVTLNLSLAELERLNQDE 654

Query: 668  QEWERRVMQFVRYQSCWRQQGVLPMLRRLMWEFEVPRRLLA-ADNARALTDVLHLSELLQ 726
              WE RVMQF  Y++ WR QGVLPMLRRL+ +F++P+ L+A +D  R LT++LHLSELLQ
Sbjct: 655  LAWESRVMQFRGYRTIWRTQGVLPMLRRLLHDFKLPQTLIARSDGERVLTNLLHLSELLQ 714

Query: 727  QASVHLDGEHALIRYLAEQCQADNPGGDTLKLRLESDADLVKVVTVHKSKGLEYPLVFLP 786
            QA+  LDGE ALIR+LAE        G+   LRLESD  LVKVVT+HKSKGLEY LVFLP
Sbjct: 715  QAASELDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYDLVFLP 774

Query: 787  FACAFRAVNQRDVPLKYHDDDGQPRLELTVSDEAVQRADHERLGEDLRKFYVALTRARYA 846
            F C+ + V+   +PL YHD++G+  + L  + E + +AD+ERL EDLR FYVALTRA++A
Sbjct: 775  FICSAKPVDGSRLPLHYHDENGKSHVSLRPTPELIAQADNERLAEDLRLFYVALTRAKHA 834

Query: 847  LWLGMAPLKD-------LEKSAPGYLLGAGEPL-EPAQLAQ---PLSAWCGAHSQMAPLP 895
             WLG+A LK        L  SA GYLLGAG  L E A LA+    L   C A      +P
Sbjct: 835  CWLGIADLKRGNSNNSVLHLSALGYLLGAGASLGESAGLARWLLDLQEGCTA-IHYGQVP 893

Query: 896  ETDDEVYRAELNAPALGQEPPLPDMR-RHRWRITSYSGLQLAPEGHYREFREPSAGDVPE 954
            E  D ++    N   L + P LP  +    W I SYS L++           P +   P+
Sbjct: 894  EAQDNLFHPPRNEATL-RAPLLPKRKAAENWWIASYSALRIGDSMSAATLEAPES---PQ 949

Query: 955  VQSAQQETFSEPQASVERLPPLPAGLDMYSFPRGAAPGSFLHGLLEWAGKEGFAALAAER 1014
             Q    +   +P A  E      +G D++ FPRG  PG+FLHGLLEWAG++GF       
Sbjct: 950  AQKLFDDERLDPDAPRE---VAASGGDIHRFPRGPNPGTFLHGLLEWAGEDGFNVTP--- 1003

Query: 1015 PRVEDQVARRCNRQGWTQWIPMLTDWLMALLSQPLALPTSPGSAVSLAGLTQYQVEMEFW 1074
              +E  V  RCNR+ W  WI  L+ WL  LL  PL +     S VSL+GL QYQ+EMEFW
Sbjct: 1004 EAIEKAVGARCNRRNWEGWIITLSSWLGHLLQTPLPV---NNSHVSLSGLQQYQIEMEFW 1060

Query: 1075 FALNQVDTQVLDQQVRAATLAGEPRAALMREQLNGMLKGFIDLVFEHQGRYYVLDYKSNW 1134
            FA ++VD   LD+ V   T  G  R A     LNGM KGFIDL FEH GRYYV DYKSNW
Sbjct: 1061 FASHKVDVLALDKLVCQYTHNGVSRVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNW 1120

Query: 1135 LGADVADYDPARMAHAMLDHRYDLQLALYLFALHRLLKSRLPDYDYDRHVGGALYLFLRG 1194
            LG D + Y    M  ++LDHRYDLQ  LYL ALHR LK+RLPDYDYDRHVGGALY+FLRG
Sbjct: 1121 LGPDDSAYTFDAMEQSILDHRYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYIFLRG 1180

Query: 1195 SQAPGGGVFAQRPDRALIEALDRLFSGE 1222
            +Q+   G +  RP R LIE LD LF G+
Sbjct: 1181 TQSASQGAYFTRPPRELIEGLDLLFQGK 1208