Pairwise Alignments

Query, 1227 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola 67-19

Subject, 1224 a.a., Chi activated ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease from Pseudomonas putida KT2440

 Score = 1241 bits (3212), Expect = 0.0
 Identities = 664/1224 (54%), Positives = 832/1224 (67%), Gaps = 36/1224 (2%)

Query: 13   LRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPDILVVTFTDAATR 72
            L FPL GS+LIEASAGTGKTFTI+ LY+RL+LGHGGEQ F R L PP ILVVTFTDAAT+
Sbjct: 9    LSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGGEQGFERELLPPQILVVTFTDAATK 68

Query: 73   ELRDRIRARLAQAAGYFQPDGKDDKEDEADPLLRALRADYPPEQWPACARKLQLAAEWMD 132
            ELR+RIRARLA+AA +F+ +      + ADPLL  LR DYP E WP CA +L++A +WMD
Sbjct: 69   ELRERIRARLAEAARFFRGE-----LEGADPLLHQLRDDYPQENWPRCAGRLEIAVQWMD 123

Query: 133  EAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRTFFFPLDARDVLE 192
            EAAVSTIHGWC RML EHAFDSGSLF QTLETD S++L +V+RDYWR F + +    +  
Sbjct: 124  EAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSELLGQVMRDYWRRFCYGMQGDALAW 183

Query: 193  LRDSWPSPEHFYRSVTPLLEYADEIGIDDLPAQIFSAVREEKTCRLAALKAPWPQWCGEL 252
            +R +W SP+     + PL            PA +  A  +++  +LA +KAPW QW  EL
Sbjct: 184  VRGNWGSPDALLPRIRPLFGRVRAQQNGPEPAALIQASLQQRGAQLARIKAPWAQWAEEL 243

Query: 253  RDVLNAAVAQKKADGRKLQARYFESWLDKLHLWATSDETT-LDIGTGWTRLTPQGLRECW 311
            R +   A+A K+ DGRK+QARYFE W DKL  WA+ ++   LD+GTG+TRLTP G+ E W
Sbjct: 244  RQICRDALAAKQVDGRKMQARYFEPWFDKLCAWASDEQLVELDLGTGFTRLTPAGMAEAW 303

Query: 312  KVPEETPQHPALTAMEALQQQLSDLPEPRSHLLRHACRWVSRRFRHEQESRAQMGFQDLL 371
            K   E P+HPAL AM+ LQQQL  L  P + LL HA  WVS RF  E+  RA+MGF D+L
Sbjct: 304  K--GEPPEHPALNAMQHLQQQLQALDSPDAPLLEHAASWVSARFEVEKRRRAEMGFDDML 361

Query: 372  TRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTLYRVADNDPQQGLILI 431
             RL  AL  + GERLA  IR QFPVA+IDEFQDTDP+QY IF+ +Y++++N  + GL +I
Sbjct: 362  VRLQHALASEAGERLASLIREQFPVALIDEFQDTDPVQYGIFERIYQISENRAETGLFMI 421

Query: 432  GDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQAMVGAVNQVFMQAENRADGA 491
            GDPKQAIYAFRGADIYTYL ARR T GR ++L TN+RS++AMV AVNQVF+QAE R  G 
Sbjct: 422  GDPKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVAAVNQVFLQAEAREAGR 481

Query: 492  GAFLFRQPDGGNPVPFLPVQANGRDEAWILEGADAAALTCWTLATDEPLSSAEYRQRMAA 551
            GAFLFR+ D  NP+PF+ V+A GR E  +++G  +AAL CW L ++EP+SS+ YRQ+MAA
Sbjct: 482  GAFLFREAD-DNPLPFIEVRAKGRGEQLLIDGEVSAALQCWQLESEEPVSSSVYRQQMAA 540

Query: 552  GCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAMAVRAQLSARGVRSV 611
             CA  +V LL  G QG +GF      LR   P D+A+LV  G EA  VRA+L+AR VRSV
Sbjct: 541  SCASHIVALLNGGQQGTSGFRNAEGELRACLPSDIAILVRDGHEAQMVRAELAAREVRSV 600

Query: 612  YLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALGTPLLGLSWQALDRLNHDEQEWE 671
            YLSD++SVF + +A +L  WL ACA+P+++RLL+AAL +  LGLS  ALDRLN DE+ WE
Sbjct: 601  YLSDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLGLSLAALDRLNQDERVWE 660

Query: 672  RRVMQFVRYQSCWRQQGVLPMLRRLMWEFEVPRRLL-AADNARALTDVLHLSELLQQASV 730
              VM+F  Y+  W++QGVLPMLR L+ +F++PR L+  +D  R LT++LHL+ELLQQA+ 
Sbjct: 661  SWVMRFRLYRDTWQRQGVLPMLRHLLHDFQLPRTLIRRSDGERVLTNLLHLAELLQQAAG 720

Query: 731  HLDGEHALIRYLAEQCQADNPGGDTLKLRLESDADLVKVVTVHKSKGLEYPLVFLPFACA 790
             LDGE ALIR+LAE   +    G+   LRLESD  LVKVVT+HKSKGLEYPLV+LPF C 
Sbjct: 721  ELDGEQALIRHLAEHLASSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFICT 780

Query: 791  FRAVNQRDVPLKYHDDDGQPRLELTVSDEAVQRADHERLGEDLRKFYVALTRARYALWLG 850
             + V+   +PL +HD +G   L LT   E ++RAD ERL EDLR  YVALTRA++A WLG
Sbjct: 781  SKPVDGSRLPLAWHDSEGNAHLTLTPDQEQIERADDERLAEDLRLLYVALTRAQHACWLG 840

Query: 851  MAPLK-------DLEKSAPGYLLGAGEPLE-PAQLA---QPLSAWCGAHSQMAPLPETDD 899
            +A LK        L +SA GYLLG G  L   AQL    Q L+A C  H     LP+ D+
Sbjct: 841  VADLKRGNLKSSQLHRSAFGYLLGGGLALAGSAQLTDWLQALAASC-PHITCPGLPQADE 899

Query: 900  EVYR-AELNAPALGQEPPLPDMRRHRWRITSYSGLQLAPEGHYREFREPSAGDVPEVQSA 958
            ++YR        L    P      H W I SYS L++          +    D  + Q  
Sbjct: 900  QMYRMPHAERELLPARRPRHAAAEH-WWIASYSALRVGD--------QTLGADSSQAQQL 950

Query: 959  QQETFSEPQASVERLPPLPAGLDMYSFPRGAAPGSFLHGLLEWAGKEGFAALAAERPRVE 1018
              +    P A V R  P  +G D++ FPRG  PG+FLHGLLEWAG+EGF+ ++A    +E
Sbjct: 951  LDD--EVPDAQVLREVPADSG-DIHRFPRGPNPGTFLHGLLEWAGREGFSEVSANPQLIE 1007

Query: 1019 DQVARRCNRQGWTQWIPMLTDWLMALLSQPLALPTSPGSAVSLAGLTQYQVEMEFWFALN 1078
              V +RCNR+ W  WIP L+ W+  LLS+ L LP S  S V+L  L  YQ+EMEFWFA +
Sbjct: 1008 RTVGQRCNRRDWAGWIPTLSHWMQRLLSEALPLPGSDQS-VTLGQLRHYQIEMEFWFASH 1066

Query: 1079 QVDTQVLDQQVRAATLAGEPRAALMREQLNGMLKGFIDLVFEHQGRYYVLDYKSNWLGAD 1138
            +VD + LD+ V   T  G  R A     LNGM KGFIDL FE  GRYYV DYKSNWLGAD
Sbjct: 1067 RVDAEQLDRLVARHTHPGLARPAAQPTVLNGMFKGFIDLAFELDGRYYVTDYKSNWLGAD 1126

Query: 1139 VADYDPARMAHAMLDHRYDLQLALYLFALHRLLKSRLPDYDYDRHVGGALYLFLRGSQAP 1198
            +  YD   M  A+L+HRYDLQ  LYL ALHR L++RL DYDYDRHVGGAL++FLRG+ + 
Sbjct: 1127 IQAYDAMAMEKAILEHRYDLQYVLYLLALHRQLRARLADYDYDRHVGGALFIFLRGASSS 1186

Query: 1199 GGGVFAQRPDRALIEALDRLFSGE 1222
            G GV+  +P R LIE+LD LF GE
Sbjct: 1187 GHGVYHAKPPRELIESLDALFRGE 1210