Pairwise Alignments

Query, 1227 a.a., exodeoxyribonuclease V subunit beta from Dickeya dianthicola 67-19

Subject, 1181 a.a., Exodeoxyribonuclease V beta chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  766 bits (1979), Expect = 0.0
 Identities = 509/1249 (40%), Positives = 688/1249 (55%), Gaps = 107/1249 (8%)

Query: 10   LDVLRFPLAGSRLIEASAGTGKTFTIAMLYVRLVLGHGGEQAFSRPLNPPDILVVTFTDA 69
            LD LR PL G RLIEASAGTGKTFTIA LY+RL+LG GG  AF RPL   ++LVVTFT+A
Sbjct: 8    LDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEA 67

Query: 70   ATRELRDRIRARLAQAAGYFQPDGKDDKEDEADPLLRALRADYPPEQWPACARKLQLAAE 129
            AT ELR RIR+ + +       +  D+      PL   L  +   ++    A+ L LA  
Sbjct: 68   ATEELRGRIRSNIHELRIACLRESTDN------PLYARLLEEISDKK--QAAQWLLLAER 119

Query: 130  WMDEAAVSTIHGWCNRMLGEHAFDSGSLFNQTLETDQSDVLLEVVRDYWRTFFFPLDARD 189
             MDEAAV TIHG+C RML  +AF+SG LF Q L  D+S +  +   D+WR   +PL  RD
Sbjct: 120  QMDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLP-RD 178

Query: 190  VLELR-DSWPSPEHFYRSVTPLLEYADEIGIDDLPAQIFSAVREEKTCRLAALKAPWPQW 248
            + ++  D W  P+   + +   L+   E  +   P      +       LA +     QW
Sbjct: 179  IAQVVFDVWKGPKALLKDIDRYLQ--GEAPVIKAPPSQEETLASRHEQILARINQVKQQW 236

Query: 249  CGELRDVLNAAVAQKKADGRKLQARYFESWLDKLHLWATSDETTLDIGTGWTRLTPQGLR 308
            C  + + L+A +     D RK        W++K+  WA  +     +     + + + L 
Sbjct: 237  CEAVSE-LDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLA 295

Query: 309  ECWKVPEETPQHPALTAMEALQQQLSDLPEPRSH---LLRHACRWVSRRFRHEQESRAQM 365
            E  K    TPQHP   A++ L      L EP S    +L  A   +      E+  R ++
Sbjct: 296  ERTKAGGVTPQHPLFVAIDNL------LGEPLSIKDLVLTRALSEIRETVAQEKRRRGEL 349

Query: 366  GFQDLLTRLDAALRGDNGERLAQRIRRQFPVAMIDEFQDTDPLQYRIFDTLYRVADNDPQ 425
            GF D+L+RLD ALR ++GE LA  IR +FPVAMIDEFQDTDP QYRIF  ++R   + P 
Sbjct: 350  GFDDMLSRLDTALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWR---HQPD 406

Query: 426  QGLILIGDPKQAIYAFRGADIYTYLRARRDTDGRHYTLGTNFRSTQAMVGAVNQVFMQAE 485
              L+LIGDPKQAIYAFRGADI+TY++AR +    HYTL TN+RS   MV +VN++F Q  
Sbjct: 407  TALLLIGDPKQAIYAFRGADIFTYMKARSEVSA-HYTLDTNWRSAPGMVNSVNKLFSQMN 465

Query: 486  NRADGAGAFLFRQPDGGNPVPFLPVQANGRDEAWILEGADAA--ALTCWTLATDEPLSSA 543
            +      AF+FR       +PF PV+   R+++   +  DA   A+T W L   E   S 
Sbjct: 466  D------AFMFRD------IPFSPVKFAPRNQSLQFKVNDAPQPAMTLW-LMEGESCGSG 512

Query: 544  EYRQRMAAGCAREMVRLLQLGGQGRAGFAVPGQALRPVRPGDMAVLVNTGREAMAVRAQL 603
            +Y+  MA  CA ++   L+ G  G A     G + RPVR  D++VLV + REA  +R  L
Sbjct: 513  DYQSYMAQVCATQIRDWLRAGQTGDA-LLTNGDSSRPVRASDISVLVRSRREAALIRDAL 571

Query: 604  SARGVRSVYLSDRESVFDSPQAGELHCWLAACADPENDRLLRAALGTPLLGLSWQALDRL 663
            +   + SVYLS+R+SVF++ +A E+   L A   PE +  LR+AL T ++GL+   ++ L
Sbjct: 572  TLLAIPSVYLSNRDSVFETLEAQEMLWVLQAVMAPERENTLRSALATSMMGLTALDIETL 631

Query: 664  NHDEQEWERRVMQFVRYQSCWRQQGVLPMLRRLMWEFEVPRRLLA-ADNARALTDVLHLS 722
            N+DE  W+  V +F  Y+  W ++GV+PMLR LM    +   LLA A   R LTD+LH+S
Sbjct: 632  NNDENAWDAVVEEFDGYRQIWHKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHIS 691

Query: 723  ELLQQASVHLDGEHALIRYLAEQCQADNPGGDTLKLRLESDADLVKVVTVHKSKGLEYPL 782
            ELLQ+A   L+ EHAL+R+LA+     +    + +LRLESD  LV++VT+HKSKGLEYPL
Sbjct: 692  ELLQEAGSQLESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIVTIHKSKGLEYPL 751

Query: 783  VFLPFACAFRAVNQRDVPLKYHDDDG-QPRLELTVSDEAVQRADHERLGEDLRKFYVALT 841
            V+LPF   FR  +Q      YHD    +  L+L+ ++E++  A+ ERL EDLR  YVALT
Sbjct: 752  VWLPFITHFRVQDQAF----YHDRHSYEAVLDLSHAEESIALAEAERLAEDLRLLYVALT 807

Query: 842  RARYALWLGMAPL----------KDLEKSAPGYLLGAGEPLEPAQLAQPLSAWCGAHSQM 891
            RA +   LG+APL           D+ +SA G LL  GEP++ A L   + A C      
Sbjct: 808  RAVWHCSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPMDAAGLRACIEALCDEDIVC 867

Query: 892  APLPETDDEVYR------AELNAPALGQEPPLPDMRRHRWRITSYSGLQLAPEGHYREFR 945
                 TD++ ++      AEL+A AL +      +    WR+TSYSGLQ    GH     
Sbjct: 868  RTPGNTDNDRWQIAAASHAELSARALQR------LLYDSWRVTSYSGLQ--QRGH----- 914

Query: 946  EPSAGDVPEVQSAQQETFSE---PQASVERLPPLPAGLDMYSFPRGAAPGSFLHGLLEWA 1002
                       S  Q+         A V      PA +  + FPRGA+PG+FLH L E  
Sbjct: 915  -----------SVAQDLIPRLDIDAAGVGEAAEAPA-MTPHHFPRGASPGTFLHSLFE-- 960

Query: 1003 GKEGFAALAAERPRVEDQVARRCNRQGW-TQWIPMLTDWLMALLSQPLALPTSPGSAVSL 1061
                   L   +P     V  +    G+ T+W P+LT WL  +L  PL      G ++S+
Sbjct: 961  ------ELDFTQPINPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPL---NETGVSLSV 1011

Query: 1062 AGLTQYQVEMEFWFALNQVDTQ-VLDQQVRAATLAGEPRAALMREQLNGMLKGFIDLVFE 1120
                + QVEMEF+  + Q  T   LD  +R          AL   Q+ GMLKGFIDLVF 
Sbjct: 1012 LTEREKQVEMEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFR 1071

Query: 1121 HQGRYYVLDYKSNWLGADVADYDPARMAHAMLDHRYDLQLALYLFALHRLLKSRLPDYDY 1180
            ++GRYY+LDYKSNWLG D A Y    MA AM  HRYDLQ  LY  ALHR L+ R+ +YDY
Sbjct: 1072 YEGRYYLLDYKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMTNYDY 1131

Query: 1181 DRHVGGALYLFLRG--SQAPGGGVFAQRPDRALIEALDRLFSGETEATA 1227
            +RH GG +YLFLRG   + P  G+F  RP  ALI  LD +F+GE    A
Sbjct: 1132 ERHFGGVIYLFLRGVDGERPQQGIFTTRPAAALINQLDDMFAGEMSEEA 1180