Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dianthicola 67-19

Subject, 611 a.a., Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  416 bits (1069), Expect = e-120
 Identities = 271/640 (42%), Positives = 358/640 (55%), Gaps = 76/640 (11%)

Query: 42  PLLLLGAALVSYQLGRGHVCLDLAA-TLADSGFSLALPPEGDRSENRKIARPAAVLAGVT 100
           P + L AAL+S+  G GHVCL L+  TL +    L +               A +    T
Sbjct: 33  PAVTLAAALLSHDAGEGHVCLPLSRLTLTEEAHPLLV---------------ACISETAT 77

Query: 101 LSAWQAALQQPQLVSSGEGSTPLVLVGARLYLRRYWRYEQDVRHAITQQLTQNHALRAAI 160
              W+  L     VS G+   PL+L G RLYL R W  E+ V     +    N A+  A+
Sbjct: 78  PIDWKKRLLASAAVSCGDSPAPLILCGERLYLNRMWCNERTVARFFNEV---NQAI--AV 132

Query: 161 APAVLRQRLDALFPTAAAGPANWQKLACALAAGSAFSIITGGPGTGKTTTVVKLLALLQS 220
               L + LDALFP       NWQK+A A+A     S+I+GGPGTGKTTTV KLLA L  
Sbjct: 133 DEDQLSRILDALFPPT--DEVNWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQ 190

Query: 221 LALEQHGKPLRIRLAAPTGKAAARLNESIAGAIAGLMLDGLAQGEAIREHINSEVVTLHR 280
           +A    G+  RIRLAAPTGKAAARL ES+  A+  L L      +A ++ I  +  TLHR
Sbjct: 191 MA---DGERCRIRLAAPTGKAAARLTESLGAALRQLPLT-----DAQKKRIPEDASTLHR 242

Query: 281 LLGSRPDTRHFRHHADNPLMLDVLVVDEASMVDLEMMAALLAAMPARSRLILLGDKDQLA 340
           LLG++P ++  RHHA NPL LDVLVVDEASM+DL MM+ L+ ++P   R+I LGD+DQLA
Sbjct: 243 LLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDSLPPHGRVIFLGDRDQLA 302

Query: 341 SVEAGALMGELCQRAAQGHYLPQTRDWLREVAGDAPDDALLDPHGSALDQSIAMLRHSYR 400
           SVEAGA++G++C     G    + R   R      P  A      ++L  S+ +L+ SYR
Sbjct: 303 SVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGA--GTQAASLRDSLCLLQKSYR 360

Query: 401 FGADSGIGQLAEAVNAGDAAALAAVWQHGYADLARLTLTANDNRALREWVIDGAVDRFAC 460
           FG+DSGIG+LA A+N GD +A+ AV+Q G++D+ + TL ++D+ A    ++D A+     
Sbjct: 361 FGSDSGIGKLAAAINCGDRSAIQAVFQQGFSDIEKRTLQSSDDYA---GMLDEAL----- 412

Query: 461 QPHAAPPVGYGDYLRRMASTRPALTAAQSEFDVWAAQILDAFGQFQLLCALRNGPWGVDS 520
                   GYG YLR +                    IL AF ++QLLCALR GP+GV  
Sbjct: 413 -------AGYGRYLRLLHE------------KATPEAILQAFNEYQLLCALREGPFGVRG 453

Query: 521 MNERIAHLLYRDGLLA--AWQGWYPGRPVMVTRNDYSQRLMNGDIGITLPVPLLQPDGSR 578
           +N+RI   + +   +       WY GRPVM+ RND +  L NGDIGI L     +  G R
Sbjct: 454 LNDRIEQAMVQQRKIQRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALD----RGQGLR 509

Query: 579 AWVTRVAFPAGDGSSGIRWVLPGRLSAVETVFAMTVHKSQGSEFAHTALLLPDCLSPILT 638
            W     F   DG+  I+ V P RL   +T +AMTVHKSQGSEF H AL+LP   SP++T
Sbjct: 510 VW-----FVMPDGT--IKSVQPSRLPEHDTTWAMTVHKSQGSEFDHAALILPSQRSPVVT 562

Query: 639 RELVYTGITRAKHAFSLGCVGEHSTVLAEAVGRRVLRVSG 678
           RELVYT +TRA+   SL        +LA A+  R  R SG
Sbjct: 563 RELVYTAVTRARRRLSLYA---DERILAGAIVTRTERRSG 599