Pairwise Alignments

Query, 670 a.a., excinuclease ABC subunit B from Dickeya dianthicola 67-19

Subject, 706 a.a., Excinuclease ABC subunit B from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  867 bits (2239), Expect = 0.0
 Identities = 439/667 (65%), Positives = 536/667 (80%), Gaps = 4/667 (0%)

Query: 5   FKLYSDFKPAGDQPGAIRRLEDGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64
           F+L+  + PAGDQP AIR+L +G+ DG   QTLLGVTGSGKTFT+ANVIA L RP +V A
Sbjct: 35  FELFLPYPPAGDQPEAIRQLVEGVNDGEVFQTLLGVTGSGKTFTMANVIARLGRPAIVFA 94

Query: 65  PNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
           PNKTLAAQLY E + FFP+NAVEYFVSYYDYYQPEAYVP  D FIEKD+++NEHIEQMRL
Sbjct: 95  PNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQMRL 154

Query: 125 SATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQYARN 184
           S TK++LERRDVV+VA+VSAIYG+G P+ Y +M++ L  G  I QR ++ +L  +QYARN
Sbjct: 155 SCTKSILERRDVVIVATVSAIYGIGKPESYHQMVMTLRTGDKIGQRDLIAQLVRMQYARN 214

Query: 185 DQAFARGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPRYTIY 244
           +Q F+RG FRVRG+ ID+FPAE  ++A+R+ELFD+EVE L LFDPLTG + Q +PR+T+Y
Sbjct: 215 EQDFSRGKFRVRGDTIDVFPAEHSEMAIRIELFDDEVETLQLFDPLTGKVRQKIPRFTVY 274

Query: 245 PKTHYVTPRERILQAMEEIKVELADRRQVLLAGNKLLEEQRLAQRTTFDLEMMNELGYCS 304
           P +HYVTPRE++L A+E IK+ELADR + L+   KL+E QRL QRT FD+EM++E+G+C 
Sbjct: 275 PSSHYVTPREQVLHAVEAIKLELADRLKQLVGEGKLVEAQRLEQRTRFDVEMLSEVGHCK 334

Query: 305 GIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKETLVEY 364
           GIENYSR L+G  PGEPP TL DYLP D ++ +DESHV + Q GGMY GDRARK TLVEY
Sbjct: 335 GIENYSRHLAGSAPGEPPSTLTDYLPKDAVMFLDESHVLMGQFGGMYNGDRARKTTLVEY 394

Query: 365 GFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLDPQLE 424
           GFRLPSALDNRP+K EEFE    Q ++VSATP +YE +   G+V++Q+VRPTGL+DP+LE
Sbjct: 395 GFRLPSALDNRPLKLEEFEQRMRQVVFVSATPADYE-KTHAGQVVEQLVRPTGLVDPELE 453

Query: 425 VRPVTTQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVE 484
           VRP T QVDD+L EIR R   NERVL+TTLTKRMAE LT+YL E+G +VRYLHSD+DTVE
Sbjct: 454 VRPATHQVDDVLQEIRIRVEKNERVLITTLTKRMAEQLTDYLTENGVKVRYLHSDVDTVE 513

Query: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544
           RVEIIRDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLRSERSLIQTIGRAAR
Sbjct: 514 RVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 573

Query: 545 NLNGKAILYADRITPSMERAMSETQRRREKQQAYNEQHGIVPQGLNKKIGDLLQIGQSAN 604
           NL GKAILYADRIT SM+RAM ETQRRR+KQ A+N   GI P+ +NK+I DL+  G  + 
Sbjct: 574 NLGGKAILYADRITDSMKRAMDETQRRRDKQIAHNLAMGIEPRSINKRIKDLID-GVYSE 632

Query: 605 GRGKGRGKKAAEPA--AQYQQLSPKALDQKIRELESQMLTHAQNLEFEEAARLRDEIHAL 662
             G+   + AAE A  A  + +S K + ++I+ LE  ML HA+NLEFE+AA +RD++  L
Sbjct: 633 KAGREADRLAAESAQRASVEDMSEKDVAREIKRLEKLMLEHARNLEFEKAAGVRDQLAHL 692

Query: 663 REQFIAA 669
           + Q   A
Sbjct: 693 KAQVFGA 699