Pairwise Alignments

Query, 588 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Dickeya dianthicola 67-19

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  269 bits (688), Expect = 2e-76
 Identities = 185/572 (32%), Positives = 294/572 (51%), Gaps = 30/572 (5%)

Query: 18  YLGAVILLIV-IAILQLLPPRLVGII---VDGVTQRQMATTTVLWWIGG----------I 63
           Y+G  +L IV   I     P L GI+   VDG++  +      + ++            I
Sbjct: 27  YVGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLRDLQLLQAVPLLI 86

Query: 64  LLVALLTYLLRYFWRIWLFGAAYQLAVELREDFYRQLSRQHPAFYLRHRTGDLIARATND 123
           +L+A    L  +    +L   +  L  +LR   + +L      ++  H +G LI+R T +
Sbjct: 87  ILIAAWQGLGSFLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFN 146

Query: 124 VDRVVFAAGEGVLTLVDSLVMGCAVLVVMCTQL--SWQLTLMALAPMPLMAVIIKRYGTQ 181
           V  V  AA + +  ++     G  V+ +    L  +W LTL+ +A +P++AV++     +
Sbjct: 147 VTMVTGAATDAIKVVIRE---GLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKK 203

Query: 182 LHQRFKDAQAAFSSLNDHAQESLTSIRMIKAFGLEDHQSGSFAQVAADAGQKNMRVARVD 241
             ++ K  Q A   +   A E++   R++++FG E ++   F Q +     K +R+ +  
Sbjct: 204 FRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTG 263

Query: 242 ARFDP----TIYIAVAFSNLLAVGGGSWMVINGSMTLGSLTSFVMYLGLMIWPMLALAWM 297
           + + P     IY A+A    L       + + G  T G L +++   GL+  P+  L+ +
Sbjct: 264 SLYTPMLQLVIYSAMAALMFLV------LFLRGDSTAGDLVAYITAAGLLPKPIRQLSEV 317

Query: 298 FNIVERGSAAYSRIRQLLSEAPVVVDGSQPLPAKSGTLAAEIAAFHYPGHSARVLNDVRF 357
            + +++G A    I + L EAP V  G+       G L     +F YPG    VL+D+ F
Sbjct: 318 SSTIQKGLAGAESIFEQLDEAPEVDTGTVEKERVEGRLEVRNLSFTYPGTEREVLSDISF 377

Query: 358 TLTPGKTLGLCGPTGSGKSTLLALLQRYFDVEQGQITYHQQPLHQIRLDELRSRFAVVGQ 417
              PG+ + L G +GSGKSTL AL+ R++  ++GQI      +   RL  LR   + V Q
Sbjct: 378 VAEPGQMIALVGRSGSGKSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQ 437

Query: 418 TPFLFSDSVANNIALGR-PDASQQQIEEAARLANVHDDILRLPQGYQTEVGERGVMLSGG 476
              LF+D+VANNIA G    A +  IE AA  A   + + RLP+G+ TEVGE GV+LSGG
Sbjct: 438 HVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGG 497

Query: 477 QKQRIAIARALLLEAEVLVLDDALSAVDGRTEHQILSNLRQWGQKRTLIISAHRLSALVD 536
           Q+QR+AIARALL  A +L+LD+A SA+D  +E  I + L    Q RT ++ AHRLS +  
Sbjct: 498 QRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEK 557

Query: 537 ADEILVLQQGHVAQRGAHEQLSQQAGWYRDMY 568
           AD+ILV+ QG + +RG H +L    G Y  ++
Sbjct: 558 ADQILVMDQGRLVERGTHTELLAANGHYARLH 589