Pairwise Alignments

Query, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola 67-19

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score =  343 bits (879), Expect = 4e-99
 Identities = 176/294 (59%), Positives = 217/294 (73%), Gaps = 1/294 (0%)

Query: 5   DQALIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAERL 64
           D  LI++FLDALWLE+ L++NT  +YR+DL     WL      L+ A    + D LA RL
Sbjct: 5   DHPLIDRFLDALWLEKGLSDNTRQAYRSDLALFNGWLQEKNLELVNAGRELILDHLAWRL 64

Query: 65  EGGYKATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLA 124
           E  YK  S+AR LS +R  ++YL REK    DP+  +  P+L + LPK L+EA V+ALLA
Sbjct: 65  EQNYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVEALLA 124

Query: 125 APVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGE 184
           AP   + I  RD+AMLE+LYA GLRV+EL+ LT+  V+LRQGV+RV+GKG+KERLVP+GE
Sbjct: 125 APDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGE 184

Query: 185 EAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLSP 244
           EA+ W+E+Y+  +R  LL G+  DVLFPS R +QMTRQTFWHRIKH A +A I    LSP
Sbjct: 185 EAIVWVERYMRDARSELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGI-GKALSP 243

Query: 245 HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPR 298
           H LRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVA  RL+ +H +HHPR
Sbjct: 244 HTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHPR 297