Pairwise Alignments

Query, 790 a.a., DNA polymerase II from Dickeya dadantii 3937

Subject, 785 a.a., DNA polymerase II from Pseudomonas simiae WCS417

 Score = 1132 bits (2928), Expect = 0.0
 Identities = 541/785 (68%), Positives = 651/785 (82%), Gaps = 4/785 (0%)

Query: 7   RQGFVLTRHWQDTPAGVQVECWLATDTGPCRVRLSPQQAVAFVPMRHQARITQLLSGERH 66
           +QGFVLTRHW+DTPAG +V  WLATD GP  +RL  Q +V F+P  H+  +  LL GER 
Sbjct: 4   QQGFVLTRHWRDTPAGTEVSFWLATDQGPRFIRLPVQTSVMFIPEAHRKPLDWLLKGERD 63

Query: 67  WQLRPLALKNFHHEPQLGLYCLQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMERFITA 126
            +LRPL L +FHH P LGLY  Q+RQ + +EK+L+ AG+ VYE D+RPPER++MERFITA
Sbjct: 64  IELRPLQLCDFHHRPVLGLYTRQHRQAMDVEKRLRAAGVDVYEGDVRPPERYMMERFITA 123

Query: 127 PVWFSGEETADGLIDQVRLKPAPDYRPPLKTVSLDIETSRHGELYCIGLEGCGQRQVFML 186
           PVWF G   A G++   ++KPAPDYRPPLK VSLDIET+  G+LY I LEGCG+RQV+ML
Sbjct: 124 PVWFGGTPDATGVLCDAQMKPAPDYRPPLKLVSLDIETTAQGDLYSIALEGCGERQVYML 183

Query: 187 GPENGNADDAGDLTLEYVASRPQLLEKLNHWLQTYDPDVIIGWNLVQFDLRVLQQHAERY 246
           GP N  A  A D  L+Y  +R QLLE+LN WL  +DPD IIGWN+VQFDLRVL +HA+R 
Sbjct: 184 GPPNKPA--AVDFKLDYCDTRAQLLERLNQWLALHDPDAIIGWNVVQFDLRVLHEHAQRL 241

Query: 247 RIPLRLGRGGQEMEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVAQSL 306
            +PL LGRG + M WREHG R  H+FA A GRLI+DGIEAL+SATW+F SFSLE VAQ+L
Sbjct: 242 NVPLMLGRGEEPMAWREHGSRN-HYFAAAAGRLIIDGIEALRSATWSFESFSLENVAQTL 300

Query: 307 LGEGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMPFLLERASVTG 366
           LGEGK    PYQR++EI + F +DKPALARYNLKDCELVTRIFEKT L+ FLLERASVTG
Sbjct: 301 LGEGKDISTPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFEKTELLKFLLERASVTG 360

Query: 367 LAADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLVLDY 426
           L ADR+GGSVAAFTHLY+P MHR GFVAPNLG+ PP+ASPGG+VMDSRPGLY+SVLVLDY
Sbjct: 361 LPADRNGGSVAAFTHLYMPLMHRQGFVAPNLGDKPPQASPGGFVMDSRPGLYESVLVLDY 420

Query: 427 KSLYPSIIRTFLIDPIGLVTGLQQPDEQHAVEGFRGAWFSRRHHCLPAIVEGIWHERDLA 486
           KSLYPSIIR+FLIDP+GL+ GL+ PD+  +VEGFRGA FSR  HCLP+IV  +   R++A
Sbjct: 421 KSLYPSIIRSFLIDPVGLIEGLKHPDDSESVEGFRGARFSRTRHCLPSIVARVSEGREVA 480

Query: 487 KQHNNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRSLIEARGYQ 546
           K+ +N PLSQALKIIMNAFYGVLGSSGCRFFD RLASSIT+RGH+IMRQTR L+EA+GY+
Sbjct: 481 KREHNAPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITMRGHQIMRQTRELVEAQGYE 540

Query: 547 VIYGDTDSTFVWLKRAHSEDDANIIGHELVAYINDWWQQHLHQQHGLTSALEMEYETHFH 606
           VIYGDTDSTFVWL  AH ++DA  IG  LV ++NDWW++HL    GL SALE++YETHF 
Sbjct: 541 VIYGDTDSTFVWLGSAHGQEDAGRIGRALVQHVNDWWREHLQTAFGLQSALELQYETHFT 600

Query: 607 RFLMPTIRGAELGSKKRYAGMTINAQG-EQMVFKGLETVRSDWTPLAQQFQQQLYQRVFH 665
           RFLMPTIRGAE GSKKRYAG+ +++ G E+MV+KGLETVRSDW+PLA++FQQ+LYQR+FH
Sbjct: 601 RFLMPTIRGAEEGSKKRYAGLVVHSDGREEMVYKGLETVRSDWSPLARRFQQELYQRIFH 660

Query: 666 REPYQEWVREYVEKTLNGEHDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYNRQYDR 725
           R+P+Q+++R+YV  TL+GE D+LL+YRKRLR +L DY+RNVPP VRAAR+AD+YN + +R
Sbjct: 661 RQPHQDYIRDYVRLTLSGEFDELLIYRKRLRRQLDDYERNVPPHVRAARLADEYNDRMNR 720

Query: 726 PLQYQSGGWISYVITVNGPEPLENRRSPLDYSHYVEKQLQPVADAILPFIHDDFATLVTG 785
           P QYQ GGWISYVI+VNGPEPLE R +P+DY HYV +QLQPVADAILPF++DDF+TLV G
Sbjct: 721 PRQYQRGGWISYVISVNGPEPLEVRHAPIDYDHYVTRQLQPVADAILPFVNDDFSTLVGG 780

Query: 786 QMGLF 790
           QMGLF
Sbjct: 781 QMGLF 785