Pairwise Alignments

Query, 790 a.a., DNA polymerase II from Dickeya dadantii 3937

Subject, 786 a.a., DNA polymerase II from Pseudomonas putida KT2440

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 542/785 (69%), Positives = 633/785 (80%), Gaps = 3/785 (0%)

Query: 7   RQGFVLTRHWQDTPAGVQVECWLATDTGPCRVRLSPQQAVAFVPMRHQARITQLLSGERH 66
           +QGFVLTRHW DTP G  VE WLATD GP  +RL+ Q++VAF+P         LL+ E  
Sbjct: 4   QQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLANETG 63

Query: 67  WQLRPLALKNFHHEPQLGLYCLQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMERFITA 126
            +L+PL LK+F H P LGLY  Q+RQL++LE++L+ AGI V+EADIRPPER+LMERFITA
Sbjct: 64  TKLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITA 123

Query: 127 PVWFSGEETADGLIDQVRLKPAPDYRPPLKTVSLDIETSRHGELYCIGLEGCGQRQVFML 186
           PV F+G+  A G+    +LKP P YRP L+ VSLDIETS  GELY I LEGCGQRQV+ML
Sbjct: 124 PVQFTGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQVYML 183

Query: 187 GPENGNADDAGDLTLEYVASRPQLLEKLNHWLQTYDPDVIIGWNLVQFDLRVLQQHAERY 246
           GP NG+A    D  LEY A R  L+ +LN W+  +DPD IIGWNLVQFDLR+L +HA+  
Sbjct: 184 GPANGDASGL-DFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAKSL 242

Query: 247 RIPLRLGRGGQEMEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVAQSL 306
           ++PL LGR G  M  R H    GH FA APGRL++DGIEAL+SATW+FASFSLE VAQ+L
Sbjct: 243 QVPLALGRNGAVMTLRSHA-GGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQTL 301

Query: 307 LGEGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMPFLLERASVTG 366
           LGEGKA D PYQR++EI +RF +DKPALARYNLKDCELVTRIF  T L+ FLLERASVTG
Sbjct: 302 LGEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTG 361

Query: 367 LAADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLVLDY 426
           LA DRSGGSVAAF HLY+P+MHR GFVAP+LG  P EASPGG+VMDSRPGLYDSVLVLDY
Sbjct: 362 LAVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLDY 421

Query: 427 KSLYPSIIRTFLIDPIGLVTGLQQPDEQHAVEGFRGAWFSRRHHCLPAIVEGIWHERDLA 486
           KSLYPSIIRTFLIDP+GL+ GL+QPD+ H+VEGFRG  FSR  HCLPAIVE +W  R+ A
Sbjct: 422 KSLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREAA 481

Query: 487 KQHNNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRSLIEARGYQ 546
           K+  N PLSQALKIIMNAFYGVLGSSGCRFFDPRLASSIT+RGH+IMRQTRSLIEA GY 
Sbjct: 482 KREGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYD 541

Query: 547 VIYGDTDSTFVWLKRAHSEDDANIIGHELVAYINDWWQQHLHQQHGLTSALEMEYETHFH 606
           VIYGDTDSTFVWLK AH+E+DA  IG ELVA +N WWQ HLH+   L SALE+++E H+ 
Sbjct: 542 VIYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVHYR 601

Query: 607 RFLMPTIRGAELGSKKRYAGMTINAQG-EQMVFKGLETVRSDWTPLAQQFQQQLYQRVFH 665
           RFLMPTIRG + GSKKRYAG+   A G E+MV+KGLE+VR+DW+PLA+QFQQ+LY RVF 
Sbjct: 602 RFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVFR 661

Query: 666 REPYQEWVREYVEKTLNGEHDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYNRQYDR 725
            EPY+++VREYV +TL GE D+LLVYRKRLR  L+DYQRNVPP VRAAR+ADDYN++  R
Sbjct: 662 SEPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQR 721

Query: 726 PLQYQSGGWISYVITVNGPEPLENRRSPLDYSHYVEKQLQPVADAILPFIHDDFATLVTG 785
           PLQYQ GGWISYVIT  GPEPLEN ++P+DY HY+ +QL PVADAILPF+ DDFA L   
Sbjct: 722 PLQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTDH 781

Query: 786 QMGLF 790
           Q+ LF
Sbjct: 782 QLLLF 786