Pairwise Alignments

Query, 790 a.a., DNA polymerase II from Dickeya dadantii 3937

Subject, 783 a.a., DNA polymerase II from Escherichia coli BL21

 Score = 1154 bits (2986), Expect = 0.0
 Identities = 558/782 (71%), Positives = 648/782 (82%), Gaps = 3/782 (0%)

Query: 9   GFVLTRHWQDTPAGVQVECWLATDTGPCRVRLSPQQAVAFVPMRHQARITQLLSGERHWQ 68
           GF+LTRHW+DTP G +V  WLATD GP +V L+PQ++VAF+P     R   +L GE+  +
Sbjct: 5   GFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGVR 64

Query: 69  LRPLALKNFHHEPQLGLYCLQYRQLLRLEKKLQEAGIPVYEADIRPPERFLMERFITAPV 128
           L PLALK+FH +P  GLYC  +RQL+  EK+L+E G+ VYEAD+RPPER+LMERFIT+PV
Sbjct: 65  LTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPV 124

Query: 129 WFSGEETADGLIDQVRLKPAPDYRPPLKTVSLDIETSRHGELYCIGLEGCGQRQVFMLGP 188
           W  G+   +G I   RLKP PDYRPPLK VS+DIET+RHGELYCIGLEGCGQR V+MLGP
Sbjct: 125 WVEGD-MHNGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGP 183

Query: 189 ENGNADDAGDLTLEYVASRPQLLEKLNHWLQTYDPDVIIGWNLVQFDLRVLQQHAERYRI 248
           ENG+A  A D  LEYVASRPQLLEKLN W   YDPDVIIGWN+VQFDLR+LQ+HAERYRI
Sbjct: 184 ENGDAS-ALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRI 242

Query: 249 PLRLGRGGQEMEWREHGYRQGHFFAGAPGRLIVDGIEALKSATWNFASFSLEFVAQSLLG 308
           PLRLGR   E+EWREHG++ G FFA A GRLI+DGIEALKSA WNF+SFSLE VAQ LLG
Sbjct: 243 PLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLG 302

Query: 309 EGKASDNPYQRLEEIEQRFQQDKPALARYNLKDCELVTRIFEKTHLMPFLLERASVTGLA 368
           EGK+ DNP+ R++EI++RF +DKPALA YNLKDCELVT+IF KT +MPFLLERA+V GL 
Sbjct: 303 EGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLP 362

Query: 369 ADRSGGSVAAFTHLYLPRMHRAGFVAPNLGEVPPEASPGGYVMDSRPGLYDSVLVLDYKS 428
            DR GGSVAAF HLY PRMHRAG+VAPNLGEVPP ASPGGYVMDSRPGLYDSVLVLDYKS
Sbjct: 363 VDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKS 422

Query: 429 LYPSIIRTFLIDPIGLVTGLQQPDEQHAVEGFRGAWFSRRHHCLPAIVEGIWHERDLAKQ 488
           LYPSIIRTFLIDP+GLV G+ QPD +H+ EGF  AWFSR  HCLP IV  IWH RD AK+
Sbjct: 423 LYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKR 482

Query: 489 HNNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRSLIEARGYQVI 548
             NKPLSQALKIIMNAFYGVLG++ CRFFDPRLASSIT+RGH+IMRQT++LIEA+GY VI
Sbjct: 483 QGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVI 542

Query: 549 YGDTDSTFVWLKRAHSEDDANIIGHELVAYINDWWQQHLHQQHGLTSALEMEYETHFHRF 608
           YGDTDSTFVWLK AHSE++A  IG  LV ++N WW + L +Q  LTSALE+EYETHF RF
Sbjct: 543 YGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQR-LTSALELEYETHFCRF 601

Query: 609 LMPTIRGAELGSKKRYAGMTINAQGEQMVFKGLETVRSDWTPLAQQFQQQLYQRVFHREP 668
           LMPTIRGA+ GSKKRYAG+      ++MVFKGLETVR+DWTPLAQQFQQ+LY R+F  EP
Sbjct: 602 LMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEP 661

Query: 669 YQEWVREYVEKTLNGEHDDLLVYRKRLRHKLSDYQRNVPPQVRAARMADDYNRQYDRPLQ 728
           YQE+VRE ++K + GE D  LVYRKRLR  LS+YQRNVPP VRAAR+AD+ N++  RPLQ
Sbjct: 662 YQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQ 721

Query: 729 YQSGGWISYVITVNGPEPLENRRSPLDYSHYVEKQLQPVADAILPFIHDDFATLVTGQMG 788
           YQ+ G I YV T NGPEPL+ +RSPLDY HY+ +QLQPVA+ ILPFI D+FATL+TGQ+G
Sbjct: 722 YQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLG 781

Query: 789 LF 790
           LF
Sbjct: 782 LF 783