Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Dickeya dadantii 3937

Subject, 607 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  227 bits (578), Expect = 1e-63
 Identities = 166/601 (27%), Positives = 282/601 (46%), Gaps = 18/601 (2%)

Query: 15  IQQQIAQRPDALAFREWAPEQEQQLDWHQVGERIRRIACGLLGLGVDVQERVAIFSDNAI 74
           ++ Q  +R   +A RE      Q   W +  +  RR+A GL  LG+   +R+ I  ++  
Sbjct: 5   LRLQAQERGAQVALREKIHGIWQGRTWLEYYQTARRVAHGLTKLGLQRGDRIVIAGEDVP 64

Query: 75  NWSLADLALLHLRAITVPLYATSSAAQASFILNEADIRTVFVGGQAQFD-LLMSLRDS-- 131
            W  ADL    +    V +Y T+  A+  +I      +    G Q Q D +L ++R+   
Sbjct: 65  EWFYADLGAQMIGVQVVGIYPTNPWAEVQYIAGHCQAKLAVTGDQEQTDKVLDAMREGPG 124

Query: 132 CPQLRTIILLDEQ-IRRRGCDIAISLQEFEEQAELSVWEPVLRQRVADRDLS-----DLF 185
            P L  I  +D + +RR       + Q   +  +  V E  L ++  D  +      D+ 
Sbjct: 125 LPHLEHIFCVDMKGLRRYEPGRPHAFQHLLDLGDQLVAEDPLAEQRLDGQIDALVPDDVN 184

Query: 186 TLIYTSGTTGEPKGVMLDYANVAIQLALHDERLQMSEQDV-SLCFLPLSHVFERIWSFFI 244
            L+YTSGTTG PKG ML + N       +    QM+ +   S+C+LPL HV ER +S  +
Sbjct: 185 ILVYTSGTTGPPKGAMLTHRNFVYGAYAYMVARQMTGKPFESVCYLPLCHVAERTYST-V 243

Query: 245 MH--RGAQNVYLRDTNQVRDAMAAVSPTVMCAVPRFYEKVFSAIHEKVAQAPWYRRTLFH 302
            H   G    +    + V   +  + PT    VPR +EK+      ++  +   +R L+ 
Sbjct: 244 QHLISGGTINFAESIDTVATNIREIGPTFFLGVPRIWEKLQQGFEFRMKDSGRAQRWLYR 303

Query: 303 WGIAQGNKRCLRR-QAGKRAGVWNALTYRLADRLVLSRLRQLLG-GKVRFLPAAGARLDD 360
            G+ +G     RR + G    + + L +     L+   +++ +G  +       GA +  
Sbjct: 304 LGMKRGRALSDRRAEHGHLKSLGDRLEFGFWYLLLFRNMQRHMGLNRTHTRMCGGASVSP 363

Query: 361 NIIAFFQAMGVRIIYGYGLTET--CATVSCWEADHYRLGSVGTSLPGIDVRIGEQNEIQV 418
             + FF  +G+ +  GYGLTE    A V        R GS G ++ G++ R+    E+ V
Sbjct: 364 ETLKFFDIIGLPVGQGYGLTEAGGLAFVQVPGRPFIR-GSCGPAMEGVEWRVEADGEVFV 422

Query: 419 RGAIVMRGYYRRPQETEDAFTPDGWFKTGDVGEMDANGNLFITERLKDLMKTSGGKYIAP 478
           R   V  GY    + T+D  + DGW  TGD+ E    G + + +R K ++ TSGGK IAP
Sbjct: 423 RSPGVFTGYLFDDKGTKDILSADGWIATGDIVEKHGEGEIVVVDRKKAIIITSGGKNIAP 482

Query: 479 QHLEGALGQDRFIEQVAVIADARKYVSALIVPCFEALEEYARSINLGYQDRLELLRHSHI 538
             +E A+    F+ +  V+ + +K++  L+   F+ +  +A   +L Y     L     +
Sbjct: 483 SEIENAIKDSPFVREAIVVGEGKKFLGGLVQIDFDTVGRWAAERDLQYTTYKSLTLLPEV 542

Query: 539 LSLFEQRLRDMQKEFARFEQVKKFTLLPAPFSQEEGELTPTLKLRRKVIHQRYQLEIEAM 598
           + L +  + ++   FAR E V+KF LL      ++GELT T K+RR +I++++  E++ +
Sbjct: 543 IELVQGVVDEVNSRFARVENVRKFVLLEKELDHDDGELTATQKVRRGLINKKFARELDII 602

Query: 599 Y 599
           Y
Sbjct: 603 Y 603