Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Dickeya dadantii 3937

Subject, 614 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  334 bits (856), Expect = 7e-96
 Identities = 194/585 (33%), Positives = 314/585 (53%), Gaps = 6/585 (1%)

Query: 19  IAQRPDALAFREWAPEQEQQLDWHQVGERIRRIACGLLGLGVDVQERVAIFSDNAINWSL 78
           +A+R D +  R+      ++  W +VG+ +R IA GL+ LG+   +  +I S+  + W  
Sbjct: 31  VARRADRVLMRQKTLGIWREWTWREVGDTVREIALGLVDLGLRPGDTASILSNTRVEWVW 90

Query: 79  ADLALLHLRAITVPLYATSSAAQASFILNEADIRTVFVGGQAQFDLLMSLRDSCPQLRTI 138
            DLA+L    ++  +Y T +A Q  ++  ++    +FV  + Q D  +  R   P+LR I
Sbjct: 91  CDLAVLSAGGVSNGIYPTDAAGQVQYLCEDSSTSVLFVEDEEQLDKALEARAHLPRLRCI 150

Query: 139 ILLDEQIRRRGCDIA-ISLQEFEEQAELSVWEPVLRQRVADRDLSDLFTLIYTSGTTGEP 197
           +++D +      D   I+L E   +   +     L QR   R   DL  LIYTSGTTG P
Sbjct: 151 VVIDPKGLEHFSDPGVITLDELRRRG--AAQPDTLAQRAGARQAGDLAILIYTSGTTGRP 208

Query: 198 KGVMLDYANVAIQLALHDERLQMSEQDVSLCFLPLSHVFERIWSFFI-MHRGAQNVYLRD 256
           KG M  +A++   +   D      E D  +CFLPL HV ER+   +   + G +  ++ +
Sbjct: 209 KGAMHSHASLLATVRGLDGIQPQDENDERMCFLPLCHVAERVIGLYASFYSGTRMNFVEN 268

Query: 257 TNQVRDAMAAVSPTVMCAVPRFYEKVFSAIHEKVAQAPWYRRTLFHWGIAQGNKRCLRRQ 316
            + V + +  ++PTV   VPR +EK +SA+   V +A   ++ L+ WGI  G++      
Sbjct: 269 PDTVPENVREIAPTVFGGVPRLWEKFYSAVTISVQEAGRVQQALYAWGIGVGHEVSAAVL 328

Query: 317 AGKRAGVWNALTYRLADRLVLSRLRQLLG-GKVRFLPAAGARLDDNIIAFFQAMGVRIIY 375
           AG+  G W  L YRLA    L  +R+ +G  + RFL    A +  ++I ++ A+GV ++ 
Sbjct: 329 AGRPVGPWLRLKYRLAGLASLDHVRRFIGIHRCRFLITGAAPISPDLIRWYLALGVPMLE 388

Query: 376 GYGLTETCATVSCWEADHYRLGSVGTSLPGIDVRIGEQN-EIQVRGAIVMRGYYRRPQET 434
            +G TE+    +   A   R GS+G + P  +VR+  Q  E+ VRGA V  GY  +P++T
Sbjct: 389 AWGQTESGGISTIMPAQAMRPGSIGRAAPCNEVRVDPQTGELLVRGANVFMGYLNQPEKT 448

Query: 435 EDAFTPDGWFKTGDVGEMDANGNLFITERLKDLMKTSGGKYIAPQHLEGALGQDRFIEQV 494
            +A   DGW +TGDVG  D  G   IT+R+KD++ T+GGK I P   E  L    ++   
Sbjct: 449 AEAIDADGWLRTGDVGVADEGGYFRITDRMKDIIITAGGKNITPSEWENELKFSPYVTDA 508

Query: 495 AVIADARKYVSALIVPCFEALEEYARSINLGYQDRLELLRHSHILSLFEQRLRDMQKEFA 554
            VI D R Y++A+++   E +E++A+  ++ + +   L R   + +L    +  +  +FA
Sbjct: 509 VVIGDRRAYLTAIVMIEQENVEKFAQDHDVPFSNYASLARSPEVQALIRGEIDKVNAKFA 568

Query: 555 RFEQVKKFTLLPAPFSQEEGELTPTLKLRRKVIHQRYQLEIEAMY 599
           R EQ+KKF LL      E+ ELTPT+KL+RK++  +Y  +IEAMY
Sbjct: 569 RVEQIKKFFLLETRLGAEDEELTPTMKLKRKLVQTKYAEQIEAMY 613