Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Dickeya dadantii 3937

Subject, 646 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  194 bits (493), Expect = 1e-53
 Identities = 157/613 (25%), Positives = 282/613 (46%), Gaps = 30/613 (4%)

Query: 5   SLPQYHLVHRIQQQIAQRPDALAFREWAPEQEQQLDWHQVGERIRRIACGLLGLGVDVQE 64
           +LPQ+ L+H      A R   +A R        +  W  V + +R +A GL   GV   +
Sbjct: 11  TLPQW-LLHNA----ATRGSEVAQRHKRDGVWHEFTWADVRDEVRALALGLRARGVQRGQ 65

Query: 65  RVAIFSDNAINWSLADLALLHLRAITVPLYATSSAAQASFILNEADIRTVFVGGQAQFDL 124
            V + S+N      A+ A + + A  V LY  ++ ++  +I+ +A    VF   Q Q D 
Sbjct: 66  TVVLLSENRPELYWAEWAAMAVGAKVVALYPDAAESEVDYIVADAQAVCVFAEDQEQVDK 125

Query: 125 LMSLRDSCPQLRTIILLDE----QIRRRGCDIAISLQEFEEQAELSVWEPVLRQRVADRD 180
           ++ +      L T++  +       R  G    +    F   A+ + W     Q V    
Sbjct: 126 VLPVMARHGGLHTVVWWESGGLWSYRHEGL---LGWDAFRAPAQDAAW---FEQAVMQGQ 179

Query: 181 LSDLFTLIYTSGTTGEPKGVMLDYANVAIQLALHDERLQMSEQDVSLCFLPLSHVFERIW 240
            SD+  L YTSGTTG PKGV+  +A++     L  + +Q+ E    L ++PLS   E+ W
Sbjct: 180 ASDIAVLSYTSGTTGAPKGVITTHASLMHNAELIGQTMQVPEGGEYLSYIPLSWATEQ-W 238

Query: 241 SFFIMH--RGAQNVYLRDTNQVRDAMAAVSPTVMCAVPRFYEKVFSAIHEKVAQAPWYRR 298
               M   R  +  +    +Q+++A+  ++  ++   PR +E + + +H ++  A  +R+
Sbjct: 239 VGVTMGLMRPLRVNFAERPDQIQEAIRELACEMVFFGPRQWESLAARVHARMLDAAPWRQ 298

Query: 299 TLFHWGIAQGNKRCLRRQAGKRAGVWNALTYRLADRLVLSRLRQLLGGK-VRFLPAAGAR 357
            +  WG+  G      +   +    W      LAD LVL  LR+ LG K  R     GA 
Sbjct: 299 KVVDWGLRIGKLARADQMDTRARSWWVRAQLPLADALVLRPLREQLGLKRARIAFTGGAA 358

Query: 358 LDDNIIAFFQAMGVRIIYGYGLTETCATVSCWEADHYRLGSVGTSLP-------GIDVRI 410
           +  +I   F AMGV +   YG +E    ++  + +     ++G ++         ++ R+
Sbjct: 359 VAPDIFRLFAAMGVMLRNVYGCSEF-GLITVHQGERVNAETIGETVAMASPWGVPMEWRV 417

Query: 411 GEQNEIQVRGAIVMRGYYRRPQETEDAFTPDGWFKTGD-VGEMDANGNLFITERLKDLMK 469
            +   ++VRG     GY+ +P+++ +    +GWF+TGD VG+  +   L   +R++ + +
Sbjct: 418 TDGGGLEVRGGAGFSGYWGKPEKSAEKMN-EGWFQTGDAVGQGPSGNELIYYDRVEHMNR 476

Query: 470 TSGGKYIAPQHLEGALGQDRFIEQVAVIAD-ARKYVSALIVPCFEALEEYARSINLGYQD 528
             GG   + Q +E  L    +I +V V+ D  R +V+AL+    +    +A    + +  
Sbjct: 477 LQGGHLFSKQFIEVRLRFSPYIREVMVVGDPTRSHVTALVNIDGDVFGRWAERNGVSFTT 536

Query: 529 RLELLRHSHILSLFEQRLRDMQKEFARFEQVKKFTLLPAPFSQEEGELTPTLKLRRKVIH 588
             +L +   +L+   + +  + +      +++ F  LP     +EGELT T KL+R  I 
Sbjct: 537 FTDLSQRPEVLAQVAKEIASVNQALPEAVRLRHFVNLPKELDADEGELTRTRKLKRDFIE 596

Query: 589 QRYQLEIEAMYAD 601
           QRY   I+AMY +
Sbjct: 597 QRYGALIDAMYGE 609