Pairwise Alignments

Query, 350 a.a., extracellular solute-binding protein from Dickeya dadantii 3937

Subject, 358 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  479 bits (1234), Expect = e-140
 Identities = 243/358 (67%), Positives = 289/358 (80%), Gaps = 9/358 (2%)

Query: 1   MKKL-LSSVLISSALFSTAAMAQD--LAALEKAARAEGEVNSVGMPDSWANWKDTWDDLS 57
           MK+L L+S+L S+    TAAMA D  L  LE AA+AEG VNSVGMPD WANWK TW+DL+
Sbjct: 1   MKQLFLASLLGSTIAMCTAAMAADTDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLA 60

Query: 58  AKYGLKHSDTDMSSAQEIAKFAAEKENASADIGDVGVAFGPVAVQKGVSQPYKPTTWEQV 117
             YGLKH DTDMSSAQEIAKF AEK+NASADIGDVG AFGP+AV++ V+QPYKP+TW QV
Sbjct: 61  KTYGLKHIDTDMSSAQEIAKFKAEKDNASADIGDVGAAFGPIAVKQEVTQPYKPSTWAQV 120

Query: 118 PDWAKDKDGHWAMAYTGTIAFIVDKQQV--KEIPHSWADLQKGNYVVTIGDVGTASQASS 175
           PDWAKDKDGHWA+AYTGTIAFIV+K+ +   E+P SWADLQ G Y V++GDV TA+QAS+
Sbjct: 121 PDWAKDKDGHWALAYTGTIAFIVNKKLLHGSEVPTSWADLQTGKYKVSVGDVSTAAQASN 180

Query: 176 GVLAASFALGGNEKNLKPALDFFAKLAKEGRLGLTNPAIANIEKGEVQVGVVWDFNGLNY 235
            VLAA+ A  G+EKN+ P L FF K+A++GRLGL+NP IA +EKGEV+VG+VWDFNGL+Y
Sbjct: 181 AVLAAAIANKGDEKNIAPGLQFFTKIAQQGRLGLSNPTIATMEKGEVEVGIVWDFNGLSY 240

Query: 236 RDKI-NKDRFEVLIPSDGSVISGYTTIINKYARHPNAAKLAREYIFSDAGQINLARGYAR 294
           + K+ N D + VLIPSDGSV SGYTTIINKYA+HPNAAKL REYIFSDAGQ+NLA+G AR
Sbjct: 241 KAKMANPDDYVVLIPSDGSVKSGYTTIINKYAKHPNAAKLTREYIFSDAGQLNLAKGNAR 300

Query: 295 PIRAQ-HITLPDDVKAKLLPQEQY--KNAHPIADAEAWDKTVKALPRLWQENVIINMK 349
           PIRA+  + LP D+   L+P EQY   N  PI DAEAW+ T K LP+LW E VI+ MK
Sbjct: 301 PIRAETDLKLPADIAKNLIPGEQYTKANPQPIKDAEAWEATSKKLPQLWNEQVIVEMK 358