Pairwise Alignments

Query, 350 a.a., extracellular solute-binding protein from Dickeya dadantii 3937

Subject, 354 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  509 bits (1311), Expect = e-149
 Identities = 249/354 (70%), Positives = 294/354 (83%), Gaps = 5/354 (1%)

Query: 1   MKKLLSSVLISSAL-FSTAAMAQ--DLAALEKAARAEGEVNSVGMPDSWANWKDTWDDLS 57
           MKK   + L+ SA+   T AMA   DL ALE AAR EG VNSVGMPD+WANWK TW+DL+
Sbjct: 1   MKKFFMASLLGSAIALCTTAMAASTDLKALEDAARKEGTVNSVGMPDAWANWKGTWEDLA 60

Query: 58  AKYGLKHSDTDMSSAQEIAKFAAEKENASADIGDVGVAFGPVAVQKGVSQPYKPTTWEQV 117
           +KYGLKHSDTDMSSAQE+AKF AEK+NASADIGDVG AFGP+AV KGVSQPYKP+TW+QV
Sbjct: 61  SKYGLKHSDTDMSSAQELAKFEAEKDNASADIGDVGAAFGPIAVTKGVSQPYKPSTWDQV 120

Query: 118 PDWAKDKDGHWAMAYTGTIAFIVDKQQVKEI--PHSWADLQKGNYVVTIGDVGTASQASS 175
           P+WAKDKDGHWA+AYTGTIAFI++K  VKE   P +W DL+KG Y V IGDVGTA+QA++
Sbjct: 121 PEWAKDKDGHWALAYTGTIAFIINKDLVKEEERPKTWHDLEKGKYKVAIGDVGTAAQAAN 180

Query: 176 GVLAASFALGGNEKNLKPALDFFAKLAKEGRLGLTNPAIANIEKGEVQVGVVWDFNGLNY 235
           GVLAA+ A  G+E N+ P L  F KLA++ RL L NP I  +EKGEV+VGVVWDFNGL+Y
Sbjct: 181 GVLAAAIAYKGDESNVAPGLQLFTKLAQQKRLSLANPTIQTLEKGEVEVGVVWDFNGLSY 240

Query: 236 RDKINKDRFEVLIPSDGSVISGYTTIINKYARHPNAAKLAREYIFSDAGQINLARGYARP 295
           R++I+  RFEVLIPSDGSVISGYTT+INKYA+HPNAAKL REYIFSDAGQINLA+G+ARP
Sbjct: 241 REQIDPKRFEVLIPSDGSVISGYTTVINKYAKHPNAAKLTREYIFSDAGQINLAKGHARP 300

Query: 296 IRAQHITLPDDVKAKLLPQEQYKNAHPIADAEAWDKTVKALPRLWQENVIINMK 349
           IRA+H+ LP DV+AKLLP +QY  A PI +AEAW+ T K LP++WQE VII M+
Sbjct: 301 IRAEHLKLPADVQAKLLPNDQYAAAQPIKNAEAWEATSKKLPQMWQEQVIIEME 354