Pairwise Alignments

Query, 256 a.a., ABC transporter permease from Dickeya dadantii 3937

Subject, 259 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  314 bits (805), Expect = 1e-90
 Identities = 152/250 (60%), Positives = 195/250 (78%)

Query: 7   VALQSIWSKEINRFARIWIQTLLPPVITMSLYFVIFGNLVGSRIGEMNGFSYMQFIVPGL 66
           VALQ+I  +E+ RF RIW QTLLPP ITM LYFVIFGNL+G +IG+M GF+YM++IVPGL
Sbjct: 10  VALQTIVYREVKRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMEYIVPGL 69

Query: 67  IMMSVITNAYANVASSFFSAKFQRNIEELLVAPVPTHIIIAGYVGGGMARGICVGVLVTA 126
           IMMSVITN+Y NV SSFF +KFQR+IEEL+V+PV  H I+ GY  GG+ RG+ VGV+VT 
Sbjct: 70  IMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTLGGVLRGLMVGVIVTL 129

Query: 127 VSLFFVPLHVHAWWMVVVTLLLTAMLFSLAGLINAVFAKTFDDISLIPTFVLTPLTYLGG 186
           +SLFF  L VH   + ++ ++LTA +FSL G INAVFA+ FDDIS+IPTFVLTPLTYLGG
Sbjct: 130 LSLFFTHLQVHHLGVTILVVVLTATIFSLLGFINAVFARNFDDISIIPTFVLTPLTYLGG 189

Query: 187 VFYSLSLLSPFWQAVSKLNPVVYMISGFRFGFLGIHDVPLALTLAVLLAFIVVFYALSWW 246
           VFYS+SLL PFWQ VS  NPV++M++ FR+G LG+ D+ +++ +  +L   VV Y     
Sbjct: 190 VFYSISLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIKISVAITFMLVATVVLYIGCAK 249

Query: 247 LIERGRGLRS 256
           L+  GRG+R+
Sbjct: 250 LLVSGRGMRT 259