Pairwise Alignments

Query, 393 a.a., outer membrane protein assembly factor BamB from Dickeya dadantii 3937

Subject, 392 a.a., BamABCDE complex OM biogenesis lipoprotein from Escherichia coli BL21

 Score =  583 bits (1502), Expect = e-171
 Identities = 289/393 (73%), Positives = 325/393 (82%), Gaps = 1/393 (0%)

Query: 1   MQLRKTLLVGLVSVTLLSGCSLFDREEDVVKMSPLPQVTNQFTPTKVWSRSVGDGTGEFY 60
           MQLRK LL GL+SVTLLSGCSLF+ EEDVVKMSPLP V NQFTPT  WS SVG G G FY
Sbjct: 1   MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFY 60

Query: 61  SNLHPTWQDSRVYAADRHGTVKALDLNSGEEKWRVDLAEKTGLLSSNRPALLSGGVAVSG 120
           SNLHP   D+ VYAADR G VKAL+ + G+E W V LAEK G  S   PALLSGGV VSG
Sbjct: 61  SNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKE-PALLSGGVTVSG 119

Query: 121 NHVYVGSERAQLFALNADDGALQWQTKVAGEVLSSPVVSDGVVIIHTSNGMLQALSESDG 180
            HVY+GSE+AQ++ALN  DG + WQTKVAGE LS PVVSDG+V+IHTSNG LQAL+E+DG
Sbjct: 120 GHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADG 179

Query: 181 TIKWTVNLDMPSLSLRGESAPTTAFGAAIVGGDNGRVSAVMINQGQLIWQQRISQPGGAT 240
            +KWTVNLDMPSLSLRGESAP TAFGAA+VGGDNGRVSAV++ QGQ+IWQQRISQ  G+T
Sbjct: 180 AVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGST 239

Query: 241 EIARLNDVDTTPVVAGNVVYALGYNGNLTALDLRSGQITWKREIGSVNDFIVDGDRIYLV 300
           EI RL+DVDTTPVV   VV+AL YNGNLTALDLRSGQI WKRE+GSVNDFIVDG+RIYLV
Sbjct: 240 EIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLV 299

Query: 301 DQDDRITALNTNGGVVIWRQGDLLHRNLTAPALYNGYLVVGDAEGYLHWVNTTDGRFVVQ 360
           DQ+DR+ AL  +GGV +W Q DLLHR LT+P LYNG LVVGD+EGYLHW+N  DGRFV Q
Sbjct: 300 DQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQ 359

Query: 361 QKVDSSGLLSKPVVASDKLLVQAKGGEVYAFTR 393
           QKVDSSG  ++PV A  KLL+QAK G VY+ TR
Sbjct: 360 QKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR 392