Pairwise Alignments

Query, 425 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

Subject, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

 Score =  449 bits (1155), Expect = e-131
 Identities = 218/381 (57%), Positives = 277/381 (72%), Gaps = 3/381 (0%)

Query: 42  AWAAGSDAPEKKEVRIGFIPLTDCASVVMASVKGFDKKYGITIVPSKEASWAAVRDKLVS 101
           AW  GSDAPEK  + +GF+ L+DCAS+V+A+ +GF + YG+T+   ++ SWA +RDKLVS
Sbjct: 15  AWVNGSDAPEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLRDKLVS 74

Query: 102 GELDAAHVLYGLLYGLQAGAAG-PQHNMAALMTLNNNGQAITLSNKLCEAGVTDGASLKR 160
           GELDAAH LYGL+Y +  G  G    +MA LM LN NGQ+I LS  L + GV    +L R
Sbjct: 75  GELDAAHSLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDR 134

Query: 161 FIAASPAGTYTFAQTFPTGTHAMWLYYWLGAAGINPFDDVRTVVVPPPQMVVNMKIGNMS 220
            +  S     TFAQTFPTGTHAMWLYYWL + GI+P  DV +VVVPPPQMV +++ G + 
Sbjct: 135 HVHQSRT-KLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGRID 193

Query: 221 GFCVGEPWNQRAITDGLGFTAATSQDIWPDHPEKVLGTTAEWVNANPNTARALTAAVLDA 280
           GFCVGEPW   A+    GFT AT+Q IWPDHPEKVLG T  +V+  PNTAR L  A+L+A
Sbjct: 194 GFCVGEPWCASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAILEA 253

Query: 281 SRWIDSSDDNRRETARVIAGRAYVNTQEETIAGRMLGQYDDGAGKRWQDAHAMRFYHDGE 340
           SR+I+ S +NRR TA++++GR Y++   + I  R+LG YDDG G  WQD HA+RF+ DGE
Sbjct: 254 SRFIEESSENRRSTAQLLSGREYLDAPLDCIEPRLLGTYDDGLGNHWQDPHALRFFADGE 313

Query: 341 VNFPYLSDGMWFLTQHKRWGLLAQEPDYQAVARQVNRIDIYKQAASAVGNVPLPSGEMRS 400
           VN PYLSDGMWF+TQ +RWGLL ++PDY  VARQV ++ +Y+QAA+A+G +     +MRS
Sbjct: 314 VNLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLPLYRQAAAALG-IATKHPDMRS 372

Query: 401 SVLIDGKRWDGSDPAGYANSF 421
           S LIDGK WDGSDPA YA SF
Sbjct: 373 SQLIDGKVWDGSDPADYARSF 393