Pairwise Alignments

Query, 425 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

Subject, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

 Score =  444 bits (1141), Expect = e-129
 Identities = 215/390 (55%), Positives = 276/390 (70%), Gaps = 3/390 (0%)

Query: 35  LPGIMNCAWAAGSDAPEKKEVRIGFIPLTDCASVVMASVKGFDKKYGITIVPSKEASWAA 94
           +P     AW  GSDAPEK  + IG++ LTDCASVV+A+ +GF +++G+T+   ++ SWA 
Sbjct: 4   VPRATPLAWVNGSDAPEKTSLNIGYMALTDCASVVVAATQGFAQQHGLTLNLQRQGSWAG 63

Query: 95  VRDKLVSGELDAAHVLYGLLYGLQAGAAG-PQHNMAALMTLNNNGQAITLSNKLCEAGVT 153
           +RDKLVSGELDAAH LYGL+Y +  G  G P  +MA LM LN N QAI LS  L   GVT
Sbjct: 64  LRDKLVSGELDAAHCLYGLVYAVHLGIGGVPASDMAVLMGLNQNAQAINLSPALQRKGVT 123

Query: 154 DGASLKRFIAASPAGTYTFAQTFPTGTHAMWLYYWLGAAGINPFDDVRTVVVPPPQMVVN 213
           +  +L R +    A   TFAQTFPTGTHAMWLYYWL + GI+P  DV +VVVPP QM  +
Sbjct: 124 NPEALARLVHQHGA-RLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAH 182

Query: 214 MKIGNMSGFCVGEPWNQRAITDGLGFTAATSQDIWPDHPEKVLGTTAEWVNANPNTARAL 273
           ++ G + GFCVGEPW   A+  G GFT ATSQ IWPDHPEKVL     +    PN+ARAL
Sbjct: 183 LQAGRIDGFCVGEPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNSARAL 242

Query: 274 TAAVLDASRWIDSSDDNRRETARVIAGRAYVNTQEETIAGRMLGQYDDGAGKRWQDAHAM 333
             A+L ASR+I+ S +NRR TA++++  AY++T  ++IA R+LG Y+DG G +WQD HA+
Sbjct: 243 IKAILTASRFIEQSPENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQDPHAL 302

Query: 334 RFYHDGEVNFPYLSDGMWFLTQHKRWGLLAQEPDYQAVARQVNRIDIYKQAASAVGNVPL 393
           R +  G  N PYLSDGMWF+TQ +RWGLL ++PDY  VARQV ++ +Y +AA ++G +  
Sbjct: 303 RLFDQGRANLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSLG-IAC 361

Query: 394 PSGEMRSSVLIDGKRWDGSDPAGYANSFSV 423
           P   MRSS+LIDG RWDGSDP GYA SFS+
Sbjct: 362 PGQPMRSSLLIDGSRWDGSDPFGYARSFSL 391